Populus trichocarpa (black cottonwood): 7479520
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Entry
7479520 CDS
T01077
Name
(RefSeq) solanesyl diphosphate synthase 3, chloroplastic/mitochondrial isoform X1
KO
K14066
geranyl diphosphate synthase [EC:
2.5.1.1
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00900
Terpenoid backbone biosynthesis
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Module
pop_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
7479520
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pop01006
]
7479520
Enzymes [BR:
pop01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
7479520
Prenyltransferases [BR:
pop01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
7479520
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
HEPPP_synt_1
Ta1207
Motif
Other DBs
NCBI-GeneID:
7479520
NCBI-ProteinID:
XP_002308360
UniProt:
A0A2K2A1X3
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Position
6:complement(11147553..11159210)
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AA seq
413 aa
AA seq
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MSLSWILRITRNGSHWFVSHRPSSYGLLLSNNSHSSTRKVFNCRETYSWTVPSFHVFKHQ
IHHQSSSLVEEQLDPFSLVADELSLLANRLRSMVIAEVPKLASAAEYFFKMGVQGKRFRP
TVLLLMATALNVRILETETGSEGDALTTELRKRQQSIAEITEMIHVASLLHDDVLDDADT
RRGIGSLNLVMGNKVAVLAGDFLLSRACVALASLKNTEVVTLLATAVEHLVNGETMQMTS
TSEQRCSMEYYMQKTYYKTASLISNSCKAIALLAGQTTEVAMLAFEYGKNLGLAYQLIDD
VLDFTGTSASLGKGSLSDIRHGIVTAPILFAMEEFPQLCSVIDRGFDKPENIDAALEYLG
KSRGIQRTRELAAKHANLAAAAIDSLPETDDEEVRKSRRALVDLTQRVITRNK
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgtcttggattttgaggatcacaagaaatggcagccattggtttgtctctcat
cgaccctcatcttatggactcttgctctccaacaattcccactcttctactcgaaaggtt
ttcaattgcagagaaacttattcttggactgtaccttcctttcatgttttcaaacatcag
attcatcaccagagcagttccttagtggaggaacagcttgacccattttcacttgttgct
gatgagctatcacttctcgctaatagattgcggtcaatggtaattgctgaggttcctaag
cttgcctcagctgccgagtacttttttaaaatgggagtacaaggaaagaggttccgtccc
acggttttgttgctgatggcgacagctttgaatgtgcgtatacttgaaacggaaactggc
agtgaaggagatgctttgacaacagaactacgtaaaagacagcaatctatagctgaaatt
accgagatgatccatgtggcaagtcttctgcatgatgatgtattggatgatgcagatacg
agacgtggtattggttcattaaatcttgttatgggcaataaggtggcagtacttgctgga
gattttctactttcacgagcttgtgtagcccttgcttctttgaaaaacacagaagttgtt
acattactagcgacagctgtagagcatcttgttaatggtgaaactatgcagatgacttcg
acatctgagcaacgttgtagcatggagtattatatgcaaaagacgtactacaagactgca
tctttgatttcaaatagctgcaaggcaattgcccttcttgctgggcaaacaacagaagtt
gcaatgttggcttttgagtatggcaaaaatctgggattggcatatcaattgattgatgat
gttcttgatttcacgggaacttctgcttcccttggaaagggttcattatctgacattcgc
catggaattgtaacagctccaatattgtttgccatggaggagttccctcagttgtgttca
gttattgaccggggctttgacaagcctgaaaacattgatgcagcccttgagtaccttggg
aagagccgtggaatacagagaacaagggagctagctgcaaagcatgctaatcttgctgca
gcagctattgattctttacctgaaactgatgacgaagaagtaagaaaatcacggagggcg
ctagttgatcttactcaaagagtaatcacaagaaataaatga
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