Populus trichocarpa (black cottonwood): 7479747
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Entry
7479747 CDS
T01077
Name
(RefSeq) probable arabinose 5-phosphate isomerase
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop01100
Metabolic pathways
pop01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pop01005
]
7479747
Enzymes [BR:
pop01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
7479747
Lipopolysaccharide biosynthesis proteins [BR:
pop01005
]
Lipid A
7479747
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
SIS_2
DUF2529
DUF6702
Motif
Other DBs
NCBI-GeneID:
7479747
NCBI-ProteinID:
XP_002302040
UniProt:
A9PBR5
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All DBs
Position
2:complement(2457906..2459821)
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AA seq
341 aa
AA seq
DB search
MGSLPPSLDLPSPNAKSQQIDQTTLLNLFKSQQNHLNYFFRNLDLSQTLTFTQTLLHCNG
TIFFSGVGKSGFVANKISQTLISLGIRAGFLSPLDALHGDIGALSASDILVLFSKSGNTE
ELLRLVPCAKAKGAYLVSVTSVEGNALTAVCDLNVRLPLERELCPFDLAPVTSTAIQMVF
GDTVAIALMGARNLSKEEYAANHPAGRIGKSLIFKVKDVMKKQNELPICKEGDLIMDQLV
ELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRNPRTIGPDAM
AVEAMKKMESPPSPVQFLPVIKDDNILIGIVTLHGLVSAGL
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgggctcactcccaccatctctggaccttccctcaccgaatgccaaatcccaacaaatt
gaccaaaccacccttctcaacctcttcaaatcccaacaaaaccacctcaactatttcttc
cgaaacctcgatctctctcaaacattaaccttcacccagacactcctccactgtaacggc
actattttcttctctggcgtcggaaaatccggtttcgtcgccaataaaatctcccaaacc
ctaatctcccttggcattcgcgccggctttctctcccctctcgacgccctccatggcgac
atcggcgccctctccgcctccgacatcctcgtcctattcagcaaatccgggaacactgag
gagttgctccgtctggttccgtgcgccaaggcgaaaggtgcgtatctggtgtcggtgacg
tccgttgaaggcaatgctctcacggcggtttgcgatttgaatgtgcgtttgcctttggag
agggaattgtgtccgtttgatttggctcctgtgacctccactgcgatccagatggttttt
ggggataccgtcgcgattgcgttgatgggagccaggaatttgagtaaggaagagtatgcg
gctaatcatcctgctggaaggatcggcaagagcttgattttcaaggtaaaggatgtgatg
aagaagcaaaatgagctaccaatctgtaaggaaggagatttgataatggatcagttagtt
gagctgacgagtaaaggatgtgggtgcctgcttgttatagatgaggagcatcacctgatc
ggaacatttacagatggtgatctacggcgtactctcaaggctagtggggaagccatcttt
aagcttacagtgggagaaatgtgcaacaggaacccaagaacaattggtcctgatgcaatg
gcagtggaagccatgaagaagatggaatcaccaccatcccctgtacaatttttgcctgtt
attaaggatgataatatcctgattggtatcgttaccctccatggattagtttcagctggg
ctttga
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