Populus trichocarpa (black cottonwood): 7482845
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Entry
7482845 CDS
T01077
Name
(RefSeq) glutamine--tRNA ligase, cytoplasmic isoform X1
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00970
Aminoacyl-tRNA biosynthesis
pop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
7482845
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pop01007
]
7482845
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pop03016
]
7482845
Enzymes [BR:
pop01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
7482845
Amino acid related enzymes [BR:
pop01007
]
Aminoacyl-tRNA synthetase
Class I (A)
7482845
Transfer RNA biogenesis [BR:
pop03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
7482845
Prokaryotic type
Other AARSs
7482845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA_synt_1c_R1
tRNA-synt_1c_C
tRNA-synt_1c_C2
tRNA_synt_1c_R2
GatB_Yqey
SurA_N
Motif
Other DBs
NCBI-GeneID:
7482845
NCBI-ProteinID:
XP_024463089
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All DBs
Position
8:complement(7939534..7948760)
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AA seq
792 aa
AA seq
DB search
MEVKEEESSGTPLELFLKIGLDERTARNTIANNKVTNNLTAVIHEAGVTEGCNRTIGNLL
YMVATKHPANALIHRPTLLGYIVSAKIKTPAQLEAAFSFLSSTASESFELKEFEEACGVG
VEVSEEDIEQTVNEVFKQNKGSILELRYRINVGDLFGHVRKRLPWADPKIVKKLIDAKLY
ELLGERTAADNEKPSKQKKEKPAKVEDKKVADENPVQPSEDLNPFLIFPNPEENFKVHTE
VFFSDRPVLRCCNTKEVLDKHLKRTSGKVYTRFPPEPNGYLHIGHAKAMFVSFGLAKERG
GCCYLRYDDTNPEAEKKEYIDHIEEIVEWMGWKPFKITYTSDYFQELYELAVELIRRGHA
YVDHQTPEEIKEYREKKMDSPWRDRPIAESLKLFEEMRLGMIEEGKATLRMKQDMQSDNG
NMYDLIAYRIKFTPHPHSGDKWCIYPSYDYAHCIVDSLEDITHSLCTLEFETRRASYYWL
LHVLDLYQPYVWEYSRLNVTNTVMSKRKLNFLVTNKHVDGWDDPRLMTLAGLKRRGVTST
AINAFVRGIGITRSDCSTIRLERLEYHIREELNRTAPRTLVVLQPLKVVVTNLESGLVMD
LDAKKWPDASTEDSSAFYKVPFSRVVYIEQSDFRMKDSKDYYGLAPGKSVLLRYAFPIKC
TEVVLADDNKSIVEIRAEYDPSKKTKPKGVIHWVAEPSREVDPLSIEVRLFDKLFNSENP
AEHEDWLSDVNLQSKVVISGAYAVPSLRDAAMGDRFQFERLGYFVVDKDSTPERLVFNRT
VTLRDSYGKSGK
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgaaagaagaagagagctcagggactccattggagctgtttttgaagatcggt
ctcgatgagagaactgctcgtaataccattgctaacaacaaggttaccaacaatctaact
gctgttatccatgaggctggtgtcaccgagggatgtaaccgaacgatcggaaatctcctt
tacatggttgctacaaagcacccagcgaatgccctcattcatcgccctactttgctggga
tacatcgtctccgcgaagattaaaaccccagcccagctagaagctgcattttcattttta
tccagtactgcttcagagagttttgagttgaaggagtttgaagaagcttgtggtgttggg
gttgaagtctctgaagaagatattgaacaaacagttaatgaagtatttaaacagaacaag
ggatcaatattggagctccgctatcgaataaatgtaggagatctatttgggcatgtccgc
aagaggcttccatgggctgatccaaagattgtcaaaaaactcatagatgcaaaattatat
gaattgcttggagaaaggactgcagcagataatgagaagccttcgaaacagaaaaaggaa
aagcctgcaaaagttgaggataaaaaagttgctgatgaaaatccagtacaaccatcagaa
gatcttaatccattcttgatatttcccaatcctgaggaaaatttcaaggtgcatactgaa
gtattcttcagcgatcgaccggttctgcgatgctgcaacacaaaggaagtgcttgataag
cacctcaaaagaaccagtggcaaagtttacactcgcttcccccctgagccaaatggatat
ctacacattggtcatgccaaggcaatgtttgttagctttggcctggcaaaggaacgaggg
ggatgctgctaccttaggtatgatgatacaaaccctgaagctgaaaagaaagaatacatc
gatcatattgaagagattgtagaatggatgggttggaaaccattcaagatcacttacact
agtgattatttccaagagctttatgaattagcagttgagctgatacggaggggccatgcc
tacgttgatcaccagacaccagaagagattaaagagtatagagaaaagaagatggacagt
ccttggagggatagacctatagcagaatctttgaaactttttgaagaaatgagactgggt
atgattgaagaaggcaaagcgacactcagaatgaaacaagacatgcagagtgataatggg
aatatgtatgacctcattgcctatcgaatcaagtttactccacatccacattcaggagac
aagtggtgtatctatcctagttatgactatgctcactgcattgtggattctctcgaggac
atcacacattcgctctgcactctggaatttgagacacggcgtgcttcatattactggttg
ttacatgtattggatctttatcagccttatgtatgggaatactcacgactgaatgttacc
aacaccgtgatgtcgaagcgtaagttaaatttcttggttacaaacaagcatgttgatggt
tgggatgaccctcgactgatgacactagctggtttaaaacggagaggtgtaacttcaact
gcaatcaatgcttttgtccggggaattggaatcactagaagtgattgtagtacaatacgc
ttggagcggcttgagtatcacataagggaagaactaaacagaacagcacctcgtacattg
gttgtgctgcagcctctgaaggtagtcgttaccaacctggagtctgggttggttatggat
cttgatgcaaaaaaatggcccgatgcctcaacagaagattcttctgctttctacaaggtt
ccattttccagagtagtatacattgaacaatctgattttcggatgaaagactcaaaggac
tactatgggcttgcccctggtaaatctgtcctgctcaggtatgcattcccgataaagtgc
acagaagtagtccttgctgatgataacaagtctattgttgagatccgggctgaatatgat
ccttccaagaagacaaaaccaaagggagttatacactgggttgctgaaccttcacgggaa
gttgatccactaagcatcgaagttagattgtttgataaactgtttaattctgagaatcct
gcagaacatgaagattggctttcagatgtgaacctgcagtccaaagtggtgatatccggt
gcatatgctgtaccatcacttagagatgctgccatgggggatagattccagtttgaacgc
cttggctactttgtggttgataaggactctactcctgagaggcttgtcttcaatcggact
gttacacttcgagacagctatggtaagagtgggaagtag
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