KEGG   Populus trichocarpa (black cottonwood): 7484401
Entry
7484401           CDS       T01077                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 6A isoform X1
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03020  RNA polymerase
pop03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    7484401
  09124 Replication and repair
   03420 Nucleotide excision repair
    7484401
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pop03021]
    7484401
   03400 DNA repair and recombination proteins [BR:pop03400]
    7484401
Transcription machinery [BR:pop03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     7484401
  RNA polymerase III system
   RNA polymerase III
     7484401
  RNA polymerase I system
   RNA polymerase I
     7484401
DNA repair and recombination proteins [BR:pop03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      7484401
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 7484401
NCBI-ProteinID: XP_024437562
LinkDB
Position
12:complement(15065795..15067866)
AA seq 143 aa
MADEDYNDVDMGYEDEPPEPEIEEGVEEDADNDNNEDDKGEPIETEDKEEQEPVERPRKT
SKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG
SYEDWGVDELIVEDSWKRQVGGD
NT seq 432 nt   +upstreamnt  +downstreamnt
atggcagacgaagattacaatgatgttgacatgggatatgaggatgagccaccagagcct
gagattgaagaaggggttgaagaagatgcagataatgataacaatgaagatgacaaaggg
gaaccaattgaaactgaagacaaagaggaacaggaaccagtggagcggcctcgtaaaaca
tcaaaatttatgacaaaatatgagcgtgcgagaattttgggaacccgtgctcttcaaatc
agcatgaatgctcccgtgatggttgagttggagggtgagactgacccgctcgagattgct
atgaaggagcttcgtgagcgaaaaatacctttcaccatccgtcgctacttgcctgatgga
agttatgaagactggggagttgatgaactaatcgtggaggactcgtggaagaggcaagtg
ggaggtgattga

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