KEGG   Populus trichocarpa (black cottonwood): 7489339
Entry
7489339           CDS       T01077                                 
Name
(RefSeq) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic
  KO
K03526  (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop00900  Terpenoid backbone biosynthesis
pop01100  Metabolic pathways
pop01110  Biosynthesis of secondary metabolites
Module
pop_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:pop00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    7489339
Enzymes [BR:pop01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.7  With an iron-sulfur protein as acceptor
    1.17.7.1  (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin)
     7489339
    1.17.7.3  (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin)
     7489339
SSDB
Motif
Pfam: GcpE Sgf11 zf-RING_7
Other DBs
NCBI-GeneID: 7489339
NCBI-ProteinID: XP_002314268
UniProt: B9HQ97
LinkDB
Position
9:2344846..2351425
AA seq 741 aa
MATGAVPASFSGLQMKESGLGFGKSMDFVRICDIKRIKSGRKKISMIRNSNTGRDIVELQ
PASEGSSLLVPRQKYCESINKTVRRKTRTVMVGNVPLGSEHPIRIQTMTTTDTKDVAATV
EQVMIIADKGADIVRLTVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVSEC
FDKIRVNPGNFADRRAQFEKLEYTDDDYQKELEHIEKVFTPLVEKCKKYGRAMRIGTNHG
SLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVVMVQAYRLLVAEMY
VQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRKLA
NLGMRAAKIQQGVAPFKEKYRRYFDFQRRSGQLPMQKEGEEVDYRGVLHRDGSVLMSVSL
DQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPPVDDNDARLALKRLIEVSMGVI
APLSEQLTKPLPNAMVLVNLKELSTGAYKLLPEGTRLVVSLRGDEPYEELEILKHIDATM
LLHDLPFSEDKIGRVHTARRLFEYLAENALNVPVIHHLQFPKGIHRDELVIGAGTNAGAL
LVDGLGDGVLIEAPDQDFDFLRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAQ
IREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIEMESAT
DALIQLIKDNGRWVDPPPAEE
NT seq 2226 nt   +upstreamnt  +downstreamnt
atggctactggggcagtaccggcatcgttttcggggctacagatgaaggaatcaggctta
gggttcggaaaaagcatggattttgtgagaatttgtgatataaagaggattaaatccggt
agaaaaaagatttcaatgatccgaaactccaatactggtcgtgatattgttgagcttcaa
ccagcatcagaagggagctctctattagtcccaagacaaaagtactgtgaatccattaac
aagactgtcaggaggaaaacacgtactgtaatggtgggaaatgtgcctcttggcagtgag
catcctatacggattcaaactatgactacaactgacactaaggatgttgctgcgacagtt
gaacaggtgatgataatagcagacaaaggagcagatatagttcggctaacagttcaaggg
aagagagaagctgatgcatgttttgaaataaaaaactctctcgtgcagaaaaattacaat
attcctctggttgcggatattcattttgctccatctgttgcgttgcgagtatctgaatgc
tttgacaagattcgtgtcaacccaggaaattttgctgataggcgagctcagtttgagaag
ctggagtacacagatgatgactatcagaaagaacttgagcatattgagaaggtttttact
ccattggttgagaaatgtaagaaatatggaagggcaatgcgtattgggacaaaccatggc
agtctttcagatcgtataatgagctactatggagattctcctaggggaatggttgaatca
gcatttgagtttgctaggatatgtcggaagttagactttcataattttgtcttttcaatg
aaagcaagcaacccagttgtcatggtccaggcataccgtctacttgtagcagaaatgtat
gttcaaggctgggattatccattacacttgggtgtcactgaagctggagaaggtgaagat
gggcggatgaaatctgcaattggcattgggactcttcttcaggatggattgggtgataca
atcagggtttcacttacagaaccaccagaagaggagatagatccttgcagaaagttagct
aatcttggtatgagagcagccaaaattcagcaaggagtggcaccatttaaggagaagtac
aggcgttactttgatttccagcgccgatctggtcaattgccaatgcaaaaggagggtgag
gaggtggattatagaggtgtcctgcaccgtgatggctctgtgctcatgtcagtttctcta
gatcagttgaaagcgcctgaacttctctacaagtcacttgccgcaaagcttgttgttggg
atgccttttaaggatttggcaacagttgattcaatcttattgagagagctcccaccggtg
gatgataacgatgctcggctagcgctcaaaaggctgatagaagttagtatgggggtaata
gctcctttatcagagcagctaacgaagccattacccaatgccatggttcttgtcaacctt
aaggagttgtcaactggggcatacaagcttttgccagaaggtacacgcttggttgtgtct
ttgcgtggtgatgagccctatgaagaactggaaattcttaaacacattgatgccacgatg
cttcttcatgatctacccttttcagaagacaagattggcagagtgcatacagcaagaagg
ttatttgagtatcttgcagaaaatgctttgaatgtccccgtgattcaccatcttcagttt
ccaaaagggatccacagggatgaactggtcattggtgctggcacaaatgctggagctctt
ttagtagatggtctaggagatggtgtcctaatagaagccccagaccaggattttgatttt
ctcagaaacacatctttcaacttattacaaggttgcagaatgagaaatacaaagacggaa
tatgtctcatgcccatcatgtggaagaactttgtttgatcttcaagagataagcgcacaa
atacgagaaaagacatcacacttgcctggtgtctcgatcgcgatcatgggttgcattgtg
aatggccctggggagatggctgatgcagattttgggtatgtcggtggtgctcctggaaag
attgacctttatgttgggaagacggtggtaaagcgtggaattgaaatggagtctgccacc
gatgcattgatccagcttattaaagataatggccgctgggtagatcctcctccggcagaa
gagtaa

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