Populus trichocarpa (black cottonwood): 7494452
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Entry
7494452 CDS
T01077
Name
(RefSeq) frataxin, mitochondrial
KO
K19054
frataxin [EC:
1.16.3.1
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00860
Porphyrin metabolism
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
7494452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pop03029
]
7494452
Enzymes [BR:
pop01000
]
1. Oxidoreductases
1.16 Oxidizing metal ions
1.16.3 With oxygen as acceptor
1.16.3.1 ferroxidase
7494452
Mitochondrial biogenesis [BR:
pop03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
7494452
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Gene cluster
GFIT
Motif
Pfam:
Frataxin_Cyay
Motif
Other DBs
NCBI-GeneID:
7494452
NCBI-ProteinID:
XP_002319394
UniProt:
A0A3N7FY71
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Position
13:14677411..14679284
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AA seq
192 aa
AA seq
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MASELQFSVRRLSTLLKHCFPSPSSFLVRSRSLLIQSSRTINHHSSSHSPPLSRTFYSSP
LLNLNSTDTEGPAAIDYRSLLQEDEFHSLADSTIHDLQEKFEEYGDSVQIDGFDIDYGNE
VLTLKLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDRSDQAWVYRRTKANLLNVLESE
MGQLFGEPIKLA
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagagctgcaattttctgtcagaaggctctccacacttctaaagcactgcttt
ccttctccttcttcattcttggtcaggtcacgttctcttcttatacaatcctcaagaact
atcaaccaccattcaagcagtcattctcctcctctttcaagaaccttctactcttctccc
ttgttaaatctcaactcaaccgacactgaaggtcctgctgccattgattaccgttcgctt
ttacaggaggatgaatttcactctctagctgattcaactattcatgaccttcaagagaaa
tttgaggaatatggtgatagtgttcaaattgatggctttgatatcgattatgggaatgag
gttttgactctaaagcttggagatttagggacttatgtgttgaacaaacaaaccccgaat
cggcaactttggttatcttcccctgtgagtggtccatcaaggtttgattgggatcgaagt
gatcaagcttgggtgtatagacggacaaaagcaaatttgttaaatgtcttggaaagtgaa
atggggcaactgtttggtgaacctatcaaacttgcttaa
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