KEGG   Populus trichocarpa (black cottonwood): 7496047
Entry
7496047           CDS       T01077                                 
Name
(RefSeq) lysine-specific demethylase JMJ30
  KO
K24444  [histone H3]-dimethyl/trimethyl-L-lysine36 demethylase [EC:1.14.11.27 1.14.11.-]
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pop03036]
    7496047
Enzymes [BR:pop01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     7496047
Chromosome and associated proteins [BR:pop03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    7496047
SSDB
Motif
Pfam: Cupin_8 JmjC_2 JmjC Cupin_2
Other DBs
NCBI-GeneID: 7496047
NCBI-ProteinID: XP_002299244
UniProt: B9GM97
LinkDB
Position
1:1209198..1213575
AA seq 413 aa
MSTATTAAAAGNYLTTPTLDAESSNLLQTISSHGGYAYVSMSTLAASGDFRAAEAAREMA
WEQLHSGPWHSVLPAWRDAYSMACLHVAKFHYRNGEFKESLRVLDLGLIMGGVLLKKDLE
SAIEIVTAKSREKESEGFEKGPKCKFVEEGDEFDKEEVLRVLPEKSLSSKIVVKKSGLSL
EGFLREHFLSGSPVIISDCMAHWPARTKWNDMDYLKRVAGDRTVPVEVGKNYLCQEWKQE
LITFSEFLEKIQSNDSSSAVPTYLAQHQLFDQINELRKDICIPDYCCAGGGELRSLNAWF
GPAGTVTPLHHDPHHNILAQVVGKKYVRLYTSSVSEELYPYNETMLCNSSQVDLDNIDDG
QYPKVHDLEFLDCILEEGEMLYIPPKWWHYVRSLTISFSVSFWWSNSESSDAS
NT seq 1242 nt   +upstreamnt  +downstreamnt
atgtccaccgcaactaccgccgccgccgccggaaactatctcacaactcctacgctcgac
gccgaatcctcaaacctcctccaaacaatctcatcccacggcggctatgcctacgtcagc
atgtcaacactcgccgcctccggcgacttcagagcggcggaggcagcgagagagatggcg
tgggagcaactccactccggtccctggcactccgtgcttccagcctggcgtgatgcctac
tcaatggcttgcttacacgtggcaaagtttcattatcgaaatggtgaattcaaagagtcg
cttagggttttggatttgggattgatcatgggaggtgtgctgttgaagaaggatttggaa
tcggctattgaaattgtgacagcgaaatcgagagaaaaggaaagtgagggttttgagaaa
ggaccaaagtgtaaatttgttgaagaaggggatgagtttgataaagaggaggtgcttcgt
gttttaccagagaagtccttgtctagtaagattgtggtgaagaaatctggtctatcttta
gagggatttttgcgtgaacattttctatctgggtctccagttataattagtgattgtatg
gctcattggcctgccaggacaaaatggaatgatatggattacttgaaaagggttgctggt
gaccgcacagttccagttgaggttgggaaaaactatctatgccaagagtggaagcaagag
cttataacattttctgagtttcttgagaagattcagtccaatgactcttcttctgcagtc
cctacatatcttgcacagcatcaattatttgatcagattaatgagttacggaaagacatt
tgcattcctgactactgctgtgctggtggtggggagcttaggtctcttaatgcttggttt
ggtccagctgggacagtgaccccactgcaccatgatccgcaccataatatacttgctcag
gttgttggcaaaaagtatgtaaggctctacacctcttcagtgtcagaggaactttatcca
tacaatgagactatgctttgcaattcaagccaggtcgacctagacaacatagatgacgga
caatatccgaaggtgcatgacctagaattcttggactgcatattagaggaaggagaaatg
ctttacatcccgccaaaatggtggcactatgtccgatctctaacaatcagtttttcagtt
agcttttggtggagcaactctgaaagttcggatgcatcgtga

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