Populus trichocarpa (black cottonwood): 7496096
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Entry
7496096 CDS
T01077
Name
(RefSeq) lycopene beta cyclase, chloroplastic/chromoplastic
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00906
Carotenoid biosynthesis
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Module
pop_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
7496096
Enzymes [BR:
pop01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
7496096
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GFIT
Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
DAO
Pyr_redox
Thi4
FAD_oxidored
HI0933_like
Pyr_redox_3
NAD_binding_8
FAD_binding_2
FAD_binding_3
GIDA
Trp_halogenase
3HCDH_N
Motif
Other DBs
NCBI-GeneID:
7496096
NCBI-ProteinID:
XP_002308903
UniProt:
B9H962
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Position
6:complement(2905212..2907432)
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AA seq
504 aa
AA seq
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MDTLLKTHNKIEFLPQFHGFSEKVSNSSSVKIQIQELRFGPKKFFSKVGRNGCVEASSSA
LLELVPETKKENLEFDLPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP
QLIWPNNYGVWVDEFDAMGLLDCLDTTWSGAVVYVNDKTKKDLDRPYGRVNRKQLKSKML
QKCISNGVKFHQAKVIKVIHEESKSLLICNDGVTIQAVVVLDATGFSRCLVQYDKPYNPG
YQVAYGILAEVEEHPFDVDKMVFMDWRDSHLNNNLELKERNSKTPTFLYAMPFSSDRIFL
EETSLVARPGVPMKDIQERMVARLRHLGIKVKSIEEDERCVIPMGGPLPVLPQRVVGIGG
TAGMVHPSTGYMVARTLAAAPIVANSIVQYLGSDRSFSGSELSAKVWKDLWPVERRRQRE
FFCFGMDILLKLDLPATRRFFDAFFDLEPHYWHGFLSSRLFLPELVLFGLSLFSHASNTS
RLEIMAKGTLPLVNMTNNLIQDRE
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggatactttgttgaaaacacataacaagattgaatttttgcctcaatttcatgggttt
tcggagaaagtgagtaattcgagctccgtaaagattcaaatccaggaacttaggtttggt
cccaaaaagtttttttcaaaagtggggaggaatggttgtgttgaggctagtagtagtgca
cttttggagcttgtaccagaaaccaagaaggaaaatcttgagtttgatcttcctatgtat
gacccatcgaaaggccttgtagttgaccttgcagttgtggggggaggtcctgcagggctt
gctgttgctcagcaagtttcggaggcagggctctcggtttgttcgattgatccatctcct
cagttgatttggcctaataattatggtgtttgggttgatgaatttgatgccatgggtttg
cttgactgccttgataccacttggtctggtgctgttgtctatgttaatgacaagacaaaa
aaagatcttgataggccttatgggagggttaataggaagcagctgaagtccaaaatgtta
cagaaatgcatatccaatggtgttaagtttcaccaagctaaagttatcaaggttattcat
gaggagtccaaatctctattgatttgcaatgatggtgtcacaatccaagctgtcgtggtt
cttgatgcaactggtttttctagatgccttgttcaatatgacaagccatataatccaggt
taccaagtggcttatggaattttggcagaggtagaagagcacccgtttgatgttgataag
atggtttttatggattggagagattcacatctgaacaacaatctggaactaaaagagaga
aacagcaagacccctactttcctctacgcaatgcccttttcatcggacaggatatttctg
gaagaaacttccctcgtagctaggcctggagtacccatgaaagatatacaggaaaggatg
gtggccagattaaggcacctaggtataaaagtgaaaagcatagaggaagatgagcgttgt
gtcattccaatggggggaccacttcctgtgctccctcaaagagtagttggaattggtggt
acagccggtatggtgcacccttcaactgggtatatggtagcaagaactctagcagctgct
ccgattgttgctaattctatcgttcagtatcttggttctgatagaagcttttcaggaagt
gagttatcagctaaagtttggaaagatttatggcccgtcgagaggaggagacaaagagag
ttcttctgttttggtatggatattttgcttaagcttgatttacctgccacaagaagattt
tttgatgcattttttgatctggaacctcattattggcacggattcctatcatctcgactg
tttctacctgagcttgtactttttgggctttcactgttctcccatgcttctaatacttct
aggttagagattatggcaaagggaactcttcctttggttaatatgaccaacaatttaata
caggacagagaatag
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