Pseudomonas oryzihabitans: APT59_13935
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Entry
APT59_13935 CDS
T04267
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
por
Pseudomonas oryzihabitans
Brite
KEGG Orthology (KO) [BR:
por00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
por03009
]
APT59_13935 (rimO)
Enzymes [BR:
por01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
APT59_13935 (rimO)
Ribosome biogenesis [BR:
por03009
]
Prokaryotic type
ribosomal protein modification factors
APT59_13935 (rimO)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRAM_2
Radical_SAM
UPF0004
TRAM
CLP1_P
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
ALZ86875
UniProt:
A0A0U4VUH9
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All DBs
Position
3063159..3064484
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AA seq
441 aa
AA seq
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MQTSAPKVGFVSLGCPKATVDSERILTQLRMEGYEIVPTYEDADVVVVNTCGFIDSAKAE
SLDAIGEAIAENGKVIVTGCMGVDEGNIRGVHPSVLAVTGPQQYEQVVSAVHEVVPPQLE
HNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLSEAERL
VKAGVKELLVISQDTSAYGVDLKYRLDFWNGQPVKTRMLELCEALSGMGVWVRLHYVYPY
PNVDDVIPLMAAGKLLPYLDIPFQHASPKVLKSMKRPAFEDKTLARIKRWREICPELTIR
STFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANELGLEPVPDEIKQDRW
ERFMAHQQAISAARLQLKVGREIEVLIDEVDDQGAIGRSYADAPEIDGNVYVDSATPLKP
GDKVWVRVTDADEYDLWAEVI
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atccaaacgtccgcccccaaggtcggtttcgtcagcctcggctgccccaaggccaccgtc
gattccgaacgcatcctcacccagctgcgcatggaaggctacgagatcgtaccgacctat
gaagacgccgacgtggtggtggtcaacacctgtggcttcatcgacagcgccaaggccgag
tccctggatgccattggcgaggccatcgccgagaacggcaaggtgatcgtcaccgggtgc
atgggcgtggacgagggcaatatccgcggcgtccatcccagtgtgctggcagtgaccggt
ccgcagcagtacgagcaggtggtcagcgccgtgcacgaggtggtgccgccacagctggag
cacaatccgctgatcgatctggtgccgccccagggcatcaagctgaccccgcgccactac
gcctacctgaagatttccgaaggctgcaaccacagctgcagcttctgcatcatcccctcc
atgcgcggcaagctggtcagccgcccggtgggcgatgtgctgtccgaggccgagcggctg
gtcaaggcgggcgtgaaggagctgctggtgatctcccaggacaccagcgcctacggcgtc
gacctcaagtaccggctggacttctggaacggccagccggtcaagacgcgcatgctggaa
ctctgcgaggcgctgtcgggcatgggggtctgggtgcgcctgcattatgtctacccctac
cccaatgtcgacgacgtcatcccgctgatggccgccggcaagctgctgccctacctggac
atccccttccagcacgccagccccaaggtactcaagtccatgaagcgcccggccttcgag
gacaagaccctggcgcgcatcaagcgctggcgggagatctgcccggagctgaccatccgc
tctaccttcatcgtcggctttcccggcgagaccgaggaagacttccagtacctgctggat
tggctgaccgaagcccagctggatcgcgtcggctgcttccagtattcgcccgttgagggc
gcaccggccaacgagctgggcctggagcctgttccggacgagatcaagcaggatcgttgg
gaacgcttcatggcgcatcagcaggccatttccgcggcgcggctacaactcaaggtaggt
cgtgagatcgaggtgctgatcgacgaggtggacgatcagggcgcgatcggccgctcctat
gccgatgccccggaaatcgacggcaacgtctatgtcgacagcgcgactccgctcaagccg
ggcgacaaggtctgggtgcgggtcaccgacgccgatgaatacgatctctgggcggaagtg
atctaa
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