Porphyromonas sp. oral taxon 275: J4862_04065
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Entry
J4862_04065 CDS
T08761
Symbol
cbiD
Name
(GenBank) cobalamin biosynthesis protein CbiD
KO
K02188
cobalt-precorrin-5B (C1)-methyltransferase [EC:
2.1.1.195
]
Organism
porp
Porphyromonas sp. oral taxon 275
Pathway
porp00860
Porphyrin metabolism
porp01100
Metabolic pathways
porp01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
porp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
J4862_04065 (cbiD)
Enzymes [BR:
porp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.195 cobalt-precorrin-5B (C1)-methyltransferase
J4862_04065 (cbiD)
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Gene cluster
GFIT
Motif
Pfam:
CbiD
CbiJ
DUF5023
Motif
Other DBs
NCBI-ProteinID:
QUB43799
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Position
1029406..1031229
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AA seq
607 aa
AA seq
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MILIFGGTTEGRIVCGVLDESGKEYYYSTKGAFQELEMVHGKRVSGAMTHEVMRQFITEQ
EIQLVIDAAHPFAAVLHKTIGEVTAELGIPVIRYERRYSERTGQVIECASYEEMIAKLEA
QPCHRLLALTGVNTIAPLKPFWSRHESYFRILDREDSREKAEAAGFPFDHIVYFQPGEDQ
ELFDRIQPDAVITKESGESGFFDEKIAPALAAGVPVYMITRPALPEHYQYVYGPVGLRKA
VQRLAPDFFPLKTGFTTGSTATAATMAALHALLHDGEALEQATIILPSGEEVELPVELVE
PTERGYRARARKYSGDDPDVTHLAEIYSEVVLTEEHSGIRFLQGEGVGRVTLPGLGLEIG
GPAINRVPRSMMEAVVRRAYPVGGVDITISIPTGRELAVKTFNPRLGILDGISIVGTSGV
VKPFSSEAFIASIVRQVDVALALGADTVVINSGAKSEKYLKGAFPELPFQSFIQYGNFIG
ETLEKLSTLSVPKVYMGIMLGKAVKLAEGNMDTHSRKVVMNKEFIHRMAEEAGCSEAAHS
LIDGLTLARELWNGLSPEDLDRLMLRVVDACYEASSRLVPDSELSLLLIDDEGNIRYTYP
HDFLSQR
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgatacttatcttcggtggcacgacggagggacgcatcgtatgtggcgtcctcgatgag
tcgggcaaagaatactattactctaccaagggagccttccaggagctcgagatggtacac
ggcaagcgtgtctcgggcgcgatgacgcatgaggtgatgcgccagttcatcaccgagcag
gagatacagctcgtcatagacgcggcgcatcccttcgctgccgtcctccacaagacgatc
ggtgaggtgacggccgagctcggcatccctgtcatccgctacgagcgacgctacagcgag
cgcacggggcaggtcatcgagtgcgccagctatgaggagatgatcgccaagctcgaggcg
cagccctgccatcggctccttgcgctgacgggcgtcaataccatcgctccgctcaagccc
ttctggtcgcgccacgagagctacttccgcatcctcgaccgagaagactcgcgggagaag
gcagaggcagcaggctttcccttcgaccatatcgtctacttccagccaggggaggaccag
gagctcttcgaccgcatacagcccgacgccgtcattaccaaggagagcggagagagtggc
ttcttcgacgagaagatcgcccctgccctcgctgcgggcgtccccgtatatatgatcacg
cgcccggctctgcccgagcactaccagtatgtctacggccccgtagggctgcgcaaggct
gtgcagcgccttgcccctgatttcttcccgctcaagacgggcttcaccactggaagtact
gccacggcggcgaccatggcggcactgcacgccctgctccatgacggagaggcgctagag
caggctacgatcatcctgccctcaggggaggaggtcgagctccccgtcgagctcgtcgag
cccacagagcgcggctaccgagctcgcgcccgtaagtactcgggcgacgaccccgacgtc
acccatctggcagagatctactcggaggtcgtactgaccgaggagcacagcggcatacgc
ttcctgcagggcgagggcgtagggcgcgtcaccctcccaggcctaggcctcgagatcggc
ggcccagctatcaaccgcgtgccacgcagcatgatggaggccgtcgtgcgccgtgcctac
cccgtgggaggtgtagatatcaccatcagcatccctacgggccgcgaactggccgtcaag
accttcaacccccgcctgggtatcctcgacgggatctccatcgtcggcacctcgggcgtc
gtcaagcccttctcctcggaggccttcatcgcctccatcgtacgtcaagtagatgtggcg
ctggccctaggcgctgataccgtcgtgatcaattcgggcgctaagagcgagaagtacctc
aagggagccttccccgagctgcccttccagtccttcatccagtacggcaacttcatcggg
gagaccctcgagaagctctccaccctctccgtccccaaggtctacatgggtatcatgctc
ggcaaggcggtaaagctcgccgagggcaatatggacacccacagccgcaaggtcgtgatg
aataaggagttcatccaccgaatggccgaggaggcgggttgtagcgaggcagcgcacagc
cttattgatgggctcacgctggcccgtgagctgtggaacggactcagtcccgaggacctc
gaccgactgatgctgcgcgtcgtcgacgcctgctacgaggcctcgagccgccttgtccca
gactctgagctctccctgctcctgattgacgacgaggggaacatccgctacacctacccc
cacgacttcctctcccagcgctag
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