Pseudomonas oryziphila: EJA05_09080
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Entry
EJA05_09080 CDS
T07791
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pory
Pseudomonas oryziphila
Pathway
pory00071
Fatty acid degradation
pory00280
Valine, leucine and isoleucine degradation
pory00310
Lysine degradation
pory00362
Benzoate degradation
pory00380
Tryptophan metabolism
pory00410
beta-Alanine metabolism
pory00640
Propanoate metabolism
pory00650
Butanoate metabolism
pory00907
Pinene, camphor and geraniol degradation
pory00930
Caprolactam degradation
pory01100
Metabolic pathways
pory01110
Biosynthesis of secondary metabolites
pory01120
Microbial metabolism in diverse environments
pory01200
Carbon metabolism
pory01212
Fatty acid metabolism
Module
pory_M00087
beta-Oxidation
pory_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pory00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
EJA05_09080 (fadB)
00650 Butanoate metabolism
EJA05_09080 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
EJA05_09080 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
EJA05_09080 (fadB)
00310 Lysine degradation
EJA05_09080 (fadB)
00380 Tryptophan metabolism
EJA05_09080 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
EJA05_09080 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
EJA05_09080 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
EJA05_09080 (fadB)
00930 Caprolactam degradation
EJA05_09080 (fadB)
Enzymes [BR:
pory01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
EJA05_09080 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
EJA05_09080 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
EJA05_09080 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
EJA05_09080 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
SDH_sah
Motif
Other DBs
NCBI-ProteinID:
AZL67883
UniProt:
A0A3Q8TZC8
LinkDB
All DBs
Position
1914305..1916452
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELREAVDAIKADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPEAELVAGNLEANRIFNAFEDLEVPTVAAINGIALGGGLE
MCLAADYRIMSSTAKIGLPEVKLGIYPGFGGTVRLPRLVGSDNAIEWIASGKENRAEDAL
KVGAVDAVVTPELLQAGALDLIKRAISGELDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTSVAESLIGLFLNDQEL
KRKAKAHDEIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEAIQLGLNEASKL
LGKRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENPKVKQAVLAEVEGQVK
EDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEANRLGQKNGKGFYAYETDKRGKP
KKVFDADVLDVLKPVVFEQREVTDEDIINWMMVPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADKYADLGPLYHPTAKLREMAKSGQRFFN
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagcggcatcgtcgaactg
aagttcgacctcaagggtgagtccgtcaacaagttcaaccgcctcactctgaacgagctg
cgcgaggccgtcgacgccatcaaggccgacgcttcggtcaagggcgtgatcgtcagcagt
ggcaaggacgtgttcatcgtcggcgccgacatcaccgagtttgtcgataatttcaagctg
cccgaggccgagctggttgccggcaacctggaagccaaccgtatcttcaacgccttcgaa
gacctcgaagtgccgacggttgccgccatcaacggcatcgccctgggcggtggcctggag
atgtgcctggccgccgattaccgaatcatgtccagcactgccaagatcggcctgccggaa
gtcaaactgggcatctacccaggctttggcggcaccgtgcgcctgccgcgcctggtcggc
tcggacaacgccatcgagtggatcgcttcgggcaaggaaaaccgtgccgaagacgccctg
aaagtcggcgccgtcgatgccgtggttacccctgagctgctgcaggcgggtgcactggac
ctgatcaagcgcgccatcagcggcgagctggactacaaggccaagcgccagcccaagctg
gagaagctcaagctcaacgccatcgaacagatgatggccttcgagactgccaagggcttc
gtcgcaggccaggccggcccgaactacccggcgccggtcgaagccatcaagagcatccag
aaagccgccaacttcggccgtgacaaggcgctggaagtcgaggccgcgggcttcgccaag
ctggccaagacctcggttgccgagagcctgatcggcctgttcctgaatgaccaggagctc
aagcgcaaggccaaggcccatgacgagatcgcccacgacgtgaagcaggccgccgtgctc
ggcgccggcatcatgggcggcggcatcgcctaccagtcggccgtcaagggcacgccgatc
ctgatgaaggacatccgtgaggaagccatccagctgggcctgaacgaggcgtccaagctg
ctcggcaagcgcgtcgagaaaggccgcctcaccccagcgaagatggccgaagcgctcaac
gccattcgcccgaccctgtcgtatggcgatttcgccaacgtcgatatcgtggtcgaggcc
gtggtcgagaacccgaaggtcaagcaagcggtcttggccgaggtggaagggcaggtgaaa
gaggacgccatcctggcctccaacacctcgaccatctcgatcaacctgctggccaaggcg
ctcaagcgcccagagaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtcgaagtcatccgtggcgagaagtccagtgaagtggccgttgccaccaccgtggcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaatgactgcccgggcttcctggtc
aaccgcgtgctgttcccgtacttcggcggcttcgccaagctggtcagcgccggtgtcgac
tttgtgcgcatcgacaaggtcatggaaaagttcggctggccgatgggcccggcctacctg
atggacgtggtcgggatcgacaccggccaccatggccgtgacgtaatggctgaaggcttc
ccggaccgcatgaaggacgatcgtcgctctgccgtcgatgcgctgtacgaggccaaccgc
ctgggccagaagaacggcaagggcttctacgcctacgagaccgacaagcgcggcaagccg
aagaaagtcttcgatgccgacgtgctcgacgtgctcaagccggtcgttttcgaacagcgt
gaggttaccgacgaagacatcatcaattggatgatggtcccgctgtgcctggagaccgtg
cgctgcctggaagacggcatcgtcgaaaccgccgccgaagccgatatgggcctggtctac
ggcatcggtttccctcctttccgcggtggcgcgctgcgctacatcgattcgatcggggtc
gccgagttcgtcgcactggccgacaagtacgccgacctggggccgctgtaccaccccacc
gcgaagctgcgcgaaatggccaagagcggccagcgcttcttcaactga
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