Pseudomonas oryziphila: EJA05_26250
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Entry
EJA05_26250 CDS
T07791
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
pory
Pseudomonas oryziphila
Pathway
pory00730
Thiamine metabolism
pory01100
Metabolic pathways
pory01240
Biosynthesis of cofactors
pory04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pory00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
EJA05_26250 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
EJA05_26250 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pory03016
]
EJA05_26250 (thiI)
Enzymes [BR:
pory01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
EJA05_26250 (thiI)
Transfer RNA biogenesis [BR:
pory03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
EJA05_26250 (thiI)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AZL71024
UniProt:
A0A3Q8U545
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Position
complement(5639593..5641047)
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AA seq
484 aa
AA seq
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MKLIVKVFPEITIKSRPVRKRFIRQLSKNIRNVLKDLDPELAVDGVWDNLEVVTRIEDEK
IQREMIERLRCTPGITHFLQVQEYPLGDFDDIVEKCKQHFGHLLAGKYFAVRCKRGGHHD
FTSMDVDRYVGSQLRQQCGAAGIELKKPEVLVRIEIRDQRLYVIHNQHNGIGGYPLGALE
QTLVLMSGGFDSTVAAYQMMRRGLMTHFCFFNLGGRAHELGVMEVAHFLWKKYGSSQRVL
FISVPFEEVVGEILNKVDNSYMGVTLKRMMLRGAAHMAERLQIDALVTGEAISQVSSQTL
PNLSIIDSATDKLVLRPLLASHKQDIIDQATEIGTADFAKHMPEYCGVISVNPTTHAKRH
RMEHEEKQFDMAVLERALERAKFISIDHVIDELGKDIEIEEVAEALPGQIVIDIRHPDAQ
EDEPLALDGIEVQAMPFYAINSKFKHLDPTRQYLLYCDKGVMSRLHAHHLLSEGHANVRV
YRPT
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttatcgtcaaagtcttcccagagatcaccatcaagagccgaccggtgcgcaag
cgcttcatccgtcagctcagcaagaacatccgcaacgtgctcaaggacctcgatcctgag
ctcgcggtcgatggcgtctgggacaatctcgaggtggtcacccgcatcgaggacgaaaag
atccagcgggaaatgatcgagcgcctgcgctgcaccccgggcatcacccacttcctgcag
gtgcaggagtacccgctgggcgactttgacgacatcgtcgaaaagtgcaagcagcacttc
ggtcacctgctggccggcaagtacttcgccgtgcgctgcaagcgtggcggccaccacgac
ttcacctcgatggacgtcgaccgctatgtcggcagccagctgcgtcagcaatgcggcgcc
gccggcatcgagctgaagaagcccgaagtgctggtgcgcatcgagatccgcgaccagcgc
ctgtacgtgatccacaaccagcacaacggcatcggcggctatccgctgggcgcccttgag
cagaccctggtgctgatgtccggtggcttcgactccaccgtggccgcctaccagatgatg
cgccgtggcctgatgacgcacttctgcttcttcaatctgggcgggcgcgcccacgagctg
ggcgtgatggaagtggcgcacttcctgtggaagaagtacggcagcagccagcgcgtgctg
ttcatcagcgtgccgttcgaggaagtggtcggcgaaatcctcaacaaggtcgacaacagc
tacatgggcgtgaccctcaagcgcatgatgctgcgcggtgccgcgcacatggccgagcgc
ctgcagatcgacgcgctggtcaccggcgaggcgatctcgcaagtgtccagccagaccctg
ccgaacctgtcgatcatcgactcggccaccgacaagctggtgctgcgcccgctgctggcc
agccacaagcaggacatcatcgaccaggccaccgaaatcggcaccgccgacttcgccaag
cacatgcccgagtactgcggcgtgatttcggtgaacccgaccacccatgccaagcgtcac
cgcatggagcacgaagagaagcagttcgacatggcggtgctggagcgtgctctggagcgc
gccaagttcatctccatcgaccacgtgatcgacgagttgggcaaggacatcgagatcgag
gaagtggccgaggcactgccgggccagatcgtcatcgacatccgtcaccccgacgcccag
gaagacgaacctctggcactggacggtatcgaagtccaggccatgccgttctacgcgatc
aacagcaagttcaagcacctggaccccacgcgccagtacctgctgtattgcgacaaaggt
gtgatgagccgtttgcacgcacaccacctgctcagtgagggacatgccaatgtgcgtgtt
tatcgtccgacataa
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