Polaromonas sp. SP1: DT070_04200
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Entry
DT070_04200 CDS
T05689
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
pos
Polaromonas sp. SP1
Pathway
pos00362
Benzoate degradation
pos00624
Polycyclic aromatic hydrocarbon degradation
pos01100
Metabolic pathways
pos01120
Microbial metabolism in diverse environments
pos01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
pos00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
DT070_04200 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
DT070_04200 (pcaH)
Enzymes [BR:
pos01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
DT070_04200 (pcaH)
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
DUF4198
SdrD_B
BIg21
Motif
Other DBs
NCBI-ProteinID:
AYQ27301
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Position
complement(890305..891018)
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AA seq
237 aa
AA seq
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MKPDLTNSFLAPRDWTSHSPHIYPGYKSTLLRGPKQPLIPIKQALAQLNAPVYGAEQLGP
LDNDLTQNAVMNGAPLGERIIVTGRVMDEDGRPVRNTLVEVWQANAAGRYVHKVDQHDAP
LDPNFLGAGRCMTDNEGRYSFKTIKPGAYPWGNHPNAWRPQHIHFSLFGDYFASRLVTQM
YFPGDPLLGYDPMYMGAPESVRDLMVSRFSLDVTEADYALGYVFDIVLRGPKATRFE
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccgacctcaccaacagctttctcgccccccgcgactggaccagccactcgccg
catatctaccccggctacaaatcgaccctgctgcgcggtcccaagcagcccctgattccc
atcaaacaggcgctggctcagctcaatgcgcccgtctatggcgcagagcaactcggcccg
ctggacaacgacctgacccaaaacgccgtcatgaacggcgccccgctgggcgaacgcatc
atcgtcaccggccgcgtgatggacgaagacggccggcccgtacgcaatacgctggtggaa
gtctggcaggccaatgccgccggccgctatgtgcacaaggtcgaccagcacgacgcgccg
ctggacccgaacttcctgggcgccggccgctgcatgaccgacaacgaaggccgctacagc
ttcaagaccatcaagcccggcgcctacccctggggcaaccaccccaacgcctggcggccg
cagcacattcacttttcgctgttcggcgactacttcgccagccgcctcgtcacgcagatg
tatttcccgggcgacccgctgctgggctacgacccgatgtacatgggcgcgcccgagagc
gtgcgtgacctcatggtctccagattcagcctcgacgtgaccgaagccgattacgcgctc
ggttatgtgttcgacatcgtgctacgcggccccaaggccacgcggtttgaataa
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