Polaromonas sp. SP1: DT070_20745
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Entry
DT070_20745 CDS
T05689
Symbol
pcaB
Name
(GenBank) 3-carboxy-cis,cis-muconate cycloisomerase
KO
K01857
3-carboxy-cis,cis-muconate cycloisomerase [EC:
5.5.1.2
]
Organism
pos
Polaromonas sp. SP1
Pathway
pos00362
Benzoate degradation
pos01100
Metabolic pathways
pos01120
Microbial metabolism in diverse environments
pos01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
pos00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
DT070_20745 (pcaB)
Enzymes [BR:
pos01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.2 3-carboxy-cis,cis-muconate cycloisomerase
DT070_20745 (pcaB)
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Motif
Pfam:
Lyase_1
NagJ_C
Motif
Other DBs
NCBI-ProteinID:
AYQ30222
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Position
complement(4421289..4422524)
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AA seq
411 aa
AA seq
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MSSIFEGFLSSSEILEAFSERNFIDAMLRFEASLARAQASAGLIPEAAAQSIVGTCKVEL
FDVAKIVRESGRAGSIAIPLVKALKETVGLFNKEAAAYVHFGSTSQDVIDTALALVSRNA
MNLIEADIRKAVTALLALARRHAADPVLARTLMQPASVTSFGFKCAGWAAPLARSLQRLQ
AAGDNALSVQLGGAVGTLAQMKGKGPQITALMAADLKLKAAAFPWHTQRDEWVALGCELG
LLVGSLGKIAKDISLMGQYEVGELAEPTEPGRGGSSAMPHKRNPVACMVALAASARVPQR
VAALLATMPQEHERALGNWQAELAEWPGLLMSAHGSVRAMAQALPGLQVDTQRMRANLDT
LRAELPADAADEWFAPELAKQAAGLAHAQADALELLLAPARTTDQRTKVNA
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtatttttgaaggttttttatcgtcgtctgaaatcctggaagcgttcagcgag
cgcaatttcattgacgccatgctgcgctttgaggcctcgctggcgcgcgcgcaggccagt
gccggcctgatcccggaggctgcggcacagtccatcgttggcacctgcaaggtcgagctg
tttgacgtggccaagatcgtgcgcgagagcgggcgcgccggcagcattgcgattccgctc
gtcaaggcgctgaaggaaaccgtggggctctttaacaaggaggccgcggcttatgtgcat
ttcggctcgacctcgcaggacgtgatcgacaccgcgctggctttggtctcgcgcaatgcg
atgaacctgatcgaagcggatatccgcaaggccgtgacggcgctgctggcgctggcccgg
cgccatgccgccgacccggtgctggcccgcaccctgatgcaaccggcttcggtcaccagc
ttcggcttcaagtgcgccggctgggccgcgccgctggcgcgcagcctgcagcgcctgcag
gccgcgggcgacaacgcactcagcgtgcagctgggcggggccgtcggcacgctcgcgcaa
atgaagggcaagggcccgcagatcacggcgctgatggcggccgacctgaagctcaaggct
gcggcctttccgtggcatacgcagcgcgacgagtgggtggcgttgggttgcgagctgggc
ctgctggtgggcagcctgggcaagatcgccaaagacatttcgctgatgggccagtacgaa
gttggcgaattggccgagccgaccgagcccgggcgcggcggctcgtcggccatgccgcac
aagcgcaaccctgtggcctgcatggttgcgctggccgccagcgcacgcgtaccgcagcgc
gtggccgccttgctggccaccatgccgcaagaacacgaacgcgcactgggcaactggcag
gccgagctggccgagtggccggggctgctgatgtcggcgcacggctcggtgcgcgcgatg
gcgcaggccttgccgggcctgcaggtcgacacgcagcgcatgcgtgccaatctcgacacg
ctgcgtgccgagctgccggcagacgcagccgacgaatggtttgcgccagagctggcgaag
caggccgccggcctggcgcatgcacaggctgacgcgctggagcttctccttgcacccgcc
agaacaaccgatcaacgcacaaaggtaaacgcatga
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