Porphyrobacter sp. YT40: E2E27_00060
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Entry
E2E27_00060 CDS
T06153
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pot
Porphyrobacter sp. YT40
Pathway
pot00300
Lysine biosynthesis
pot01100
Metabolic pathways
pot01120
Microbial metabolism in diverse environments
pot01230
Biosynthesis of amino acids
Module
pot_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pot00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
E2E27_00060 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pot01002
]
E2E27_00060 (dapE)
Enzymes [BR:
pot01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
E2E27_00060 (dapE)
Peptidases and inhibitors [BR:
pot01002
]
Metallo peptidases
Family M20
E2E27_00060 (dapE)
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GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
QDH32877
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Position
complement(10461..11606)
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AA seq
381 aa
AA seq
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MLDPLDLAKRLIAAPSVTPAIGAVFAELEAMLVPLGFAVHRFTRGDGPEGSDEAPVENLL
ALRAGPPGSRHIAFAGHLDVVPPGEGWASDPFTPEERGELLHGRGAVDMKGAIAAMVAAV
AEVPAETGTISFIITGDEEGPALHGTRALIDYMAETGIQPDLCLVGEPTSVNRLGDMVKI
GRRGSVNIFIDVAGTQGHVAYPHLADNPLPKLVAILAELDALTLDTGTRWFQPSNLEITD
INVGNRAHNVIPASGGARISIRFNDLHTGKSLSDRVMAIAAKHGGTARPVISGEPFLTEP
GAFSKLVSDAVEAETGLKPELSTTGGTSDARFLRSVCPVIEFGLCNATMHKRDEAVAIPD
LAVLARIYARIARAALALEED
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaccctctcgaccttgccaagcgcttgattgccgcgccctcggtgacgcctgcg
atcggcgcggtgtttgccgagctggaagcgatgctggtgccgctgggctttgccgtccac
cgcttcacccgtggcgacgggccggaggggagcgatgaggccccggtcgaaaaccttctc
gccctgcgcgccgggccaccgggatcgcgccacattgcgtttgccgggcacctcgatgtc
gtgccgccgggggaaggctgggcctctgaccccttcacgccggaggagcgcggcgagctg
cttcacgggcgcggcgcggtcgacatgaagggcgcgatcgccgcgatggtcgctgcggtt
gccgaggtgccagcggagaccggcaccatcagtttcatcatcaccggcgacgaggaaggc
cccgcgctccacggcacccgcgcgctgatcgactacatggccgaaaccggcatccagccc
gacctgtgcctggtgggcgagcccacctcggtcaatcggctgggcgatatggtcaaaatc
ggccgcaggggctcggtcaatatcttcatcgacgtcgcgggcacgcagggccatgttgcc
tacccgcatcttgccgacaatccgctgcccaagctggtcgcgatccttgcggaactcgac
gcgctgacactcgacaccgggacgaggtggttccagcccagcaacctcgagatcaccgac
atcaacgtcggcaaccgcgcgcacaacgtgatccccgcaagcggcggggcgcgcatctcg
atccgcttcaacgatcttcacaccggcaagagcctgtccgaccgggtcatggcgattgcc
gccaagcacggcggcaccgcgcgcccggtgatctcgggcgagccgttcctgaccgagccc
ggcgcgttctccaaactggtgagcgacgcggtcgaggccgagaccgggctcaagcccgaa
ctcagcaccaccggcggcacgtccgacgcgcgcttcctgcgcagcgtgtgcccggtgatc
gaattcggcctgtgcaacgcaaccatgcacaagcgcgacgaggcggtggcgatccccgat
cttgccgtgctggcccgcatctatgcccgcatcgcccgggccgcactggcgctggaggag
gattag
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