Porphyrobacter sp. YT40: E2E27_07650
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Entry
E2E27_07650 CDS
T06153
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
pot
Porphyrobacter sp. YT40
Pathway
pot00190
Oxidative phosphorylation
pot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pot00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
E2E27_07650
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E2E27_07650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pot03019
]
E2E27_07650
Enzymes [BR:
pot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
E2E27_07650
Messenger RNA biogenesis [BR:
pot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
E2E27_07650
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Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
QDH34206
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All DBs
Position
1639454..1641655
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AA seq
733 aa
AA seq
DB search
MSTSPKGSMDASASAGPVPMAELGPDESPYFNRELSWLQFNQRVLAEADNPAYPLLERLR
FLSISGSNLDEFMMIRVAGLVGQVQRRLATPSIDGRSPTQQLAAIREKLTELSAIQQTIW
RKVRDGLAGADIHIADEQRVSAAAHKWLKGYFLNEILPIITPQALDPAHPFPFVQNRGLG
LLFTLTRDATREQLIEMVLIPSALPRFVRVPDEVTGGSGALYISIASLIQRYASALFPGF
AIEGDGLFRVLRDSDIEIEEEAEDLVRTFRSAIQRRRRGQVIQLELEEDFDPAAETLLRE
QLGINEAAVIKTDGMIGIDGLSEIVGEDRPDLKFDAYSPRFPERIREHDGDAFSAIREKD
IIIHHPYESFEVVVDFIRQAALDPDVVAIKQTLYRAGSQSAVVGALIEAAEAGKSVTAVV
ELKARFDEEQNLKWASKLERAGVQVIYGFTDWKTHAKVAMVVRREGDGFRSYCHFGTGNY
HPVTARVYTDLSFFTADPKLARDAAKMFNFITGYVEPHELERIHIAPIDLRQEIYNRIDA
EIAHARKGKPAAIWMKCNQLTDEGVIDRLYAASNAGVQVELVVRGICCLRPGMAGMSENI
RVKSVIGRFLEHSRIYAFGNGHGLPSAQSAVFIASADMMGRNLDRRIETLIPILNRTVHD
QVLQQVLLANMLDTEQSWWLHSDGSYSRVETEEGARPFNCHRYFMTNPSLSGRGGSLEAG
AVPKLSLRRGASA
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgtcacccaagggcagcatggacgcatcagccagtgcagggccggtgccgatg
gccgaactcgggcctgatgaatccccctatttcaaccgcgaactgagctggctgcaattc
aaccagcgcgttctggccgaggcggacaatcccgcttacccattgctcgaaaggctgcgg
ttcctgtcgatttccggcagcaatctcgacgaattcatgatgatccgcgtcgccgggctg
gtcgggcaggtgcagcggcggctggcgacgccgtccatcgacgggcgcagccccacgcag
cagcttgccgcaattcgcgagaagctgaccgaactcagcgccatccagcagacgatctgg
cgcaaggtacgagatggcctcgcgggcgctgacatccacatcgccgatgaacagcgcgtc
agcgcggcggcgcacaagtggctgaagggctatttcctcaacgagatcctgccgatcatc
acgccccaggcgctcgacccggcacatccctttcctttcgttcagaaccgcgggctgggc
ctgctcttcacgctgacccgcgatgcgacgcgcgaacagctgatcgagatggtgctgatc
cccagcgccctgccgcgtttcgtgcgcgtgccggacgaggtgacgggcggcagcggggcg
ctgtatatttccatcgccagcctgatccagcgctatgcctccgcactgtttcccggcttc
gcgatcgagggtgacggcctgttccgggtgctgcgcgacagcgatatcgagatcgaggaa
gaggccgaggatctggtgcgcaccttccgcagcgcgatccagcgccgccgccgcggtcag
gtgatccagctggagctggaagaggatttcgaccccgcagccgagactttgctgcgcgaa
caactcggcatcaacgaggccgccgtcatcaagaccgatggcatgatcgggatcgacggg
ctctccgaaatcgtcggcgaggatcgccccgatctcaagttcgatgcctattccccgcgc
tttcccgaacgcatccgcgagcatgacggcgatgccttttcggcgatccgggagaaggac
atcatcatccaccacccctatgaaagcttcgaggtggtggtcgacttcatccggcaggcc
gcgctcgaccccgacgtggtggcgatcaagcagacgctctaccgcgcgggttctcagtcg
gcggtggtgggtgcgctgatcgaggcggccgaggcaggcaagtcggtgacggcggttgtc
gagctcaaggcccgcttcgacgaagagcagaacctcaagtgggcaagcaagctcgaacgt
gcgggcgtgcaggtgatctacggcttcaccgattggaaaacccacgccaaggtggcgatg
gtggtgcggcgcgagggcgatggcttccgcagctattgccacttcggcaccggcaattac
cacccggtcaccgcgcgggtgtataccgacctcagctttttcaccgccgatcccaagctg
gcgcgcgatgcggccaagatgttcaacttcatcaccggctatgtcgagccgcacgagctg
gagcgcatccatatcgcgccgatcgatctgcggcaggaaatctacaaccggatcgacgcc
gagatcgcccatgcccgcaagggcaagccggcggcgatctggatgaagtgcaaccagctg
accgacgaaggcgtgatcgaccggctctacgccgccagcaatgccggcgtgcaggtggaa
ctggtggttcgcggcatctgctgcctgcgtccgggcatggcgggcatgagcgagaatatc
cgcgtgaagtccgtgatcgggcgctttctcgaacacagccgcatctacgctttcggcaac
ggccacggtctgcccagcgcgcagtcggcggtcttcatcgcctcggccgacatgatgggg
cgcaacctcgaccgccggatcgagacgctgatccccatcctcaaccgcacggtgcacgat
caggtgttgcagcaggtgctgctcgccaacatgctcgacaccgaacagagctggtggctg
cattccgacggcagctattcgcgggtcgagaccgaggagggcgcgcggcccttcaactgt
caccgctatttcatgaccaacccctcgctctccgggcgcgggggttcactggaggcaggg
gcggtgcccaagctcagcttgcgacggggagcttcggcatga
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