Porphyrobacter sp. YT40: E2E27_18125
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Entry
E2E27_18125 CDS
T06153
Name
(GenBank) protocatechuate 3,4-dioxygenase
KO
K04101
protocatechuate 4,5-dioxygenase, beta chain [EC:
1.13.11.8
]
Organism
pot
Porphyrobacter sp. YT40
Pathway
pot00362
Benzoate degradation
pot00624
Polycyclic aromatic hydrocarbon degradation
pot00627
Aminobenzoate degradation
pot01100
Metabolic pathways
pot01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pot00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
E2E27_18125
00627 Aminobenzoate degradation
E2E27_18125
00624 Polycyclic aromatic hydrocarbon degradation
E2E27_18125
Enzymes [BR:
pot01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
E2E27_18125
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Motif
Pfam:
LigB
Motif
Other DBs
NCBI-ProteinID:
QDH36371
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Position
pYT40:89726..90589
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AA seq
287 aa
AA seq
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MARISAGVATSHIPAIGATIDNGKTGEPYWAPVFAGYDWSKQWIAEEKPDVVIIVYNDHA
SAFDMRIIPTFAIGCADRYGICDEGWGPRPVPEVIGHADLAWHIAQSLILDEFDMTIINE
MDVDHGLTVPLSLMFGQPEAWPVKVIPIAVNVVTYPPPSGNRCWQLGEAIARAVASFPED
LNVQVWGTGGMSHQLQGPRAGLINAEWDNRFLDLMSTNDGETLRTIPHIEYLRETGSEGI
EMVMWLIMRGALGRMVKPLHRHYHVPASNTAVGHLILRPAESSSSEV
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcatttccgccggcgtcgcgacaagccatattcccgcgatcggcgccacgatc
gacaacggcaagacgggcgagccttattgggcgccggtatttgccggctatgactggtcg
aagcaatggatcgccgaagaaaagcccgacgtagtcatcattgtctacaatgaccatgcg
tcggctttcgacatgcggataatccccactttcgcgatcggctgcgccgatcgctacggt
atttgtgatgaaggctggggaccgcggccggtgccggaggtgatcgggcatgcagacctt
gcttggcacattgcgcaaagcctgatcctggacgagttcgacatgaccatcatcaacgag
atggacgtcgaccacggcttgaccgttccgctcagtctcatgttcggtcagcccgaggcc
tggccggtaaaggtcattccgattgccgtgaatgtggtcacatatccgccgccatcgggc
aaccggtgctggcaattgggcgaggcgatcgcgcgggcagtggcgagcttccccgaagat
ctcaacgtgcaggtctggggtacgggtggtatgagccaccagttgcaggggcctcgagcg
ggcctgatcaatgcggaatgggacaaccgcttcctcgatttgatgagcacaaatgacggg
gagacgcttcgtaccattccccatatcgaatatctgcgcgagacgggctccgaaggcatc
gaaatggtgatgtggctcatcatgcgcggggcgctgggccgcatggtcaagccattgcat
cggcactatcacgtcccggcgtccaataccgcggtcggacatctcatattgaggccggct
gagagttcgtcatcggaggtctag
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