Paralichthys olivaceus (Japanese flounder): 109632202
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Entry
109632202 CDS
T06037
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pov03016
]
109632202 (cdkal1)
Enzymes [BR:
pov01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
109632202 (cdkal1)
Transfer RNA biogenesis [BR:
pov03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
109632202 (cdkal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
109632202
NCBI-ProteinID:
XP_019946933
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MPSTCDTLIEDIEDMVSSSDPTPQERLTARKSIIPRSRKRKELLNNEELQADSLIPGTQK
IWMKTWGCSHNSSDGEYMAGQLAASGYKMTDDPTEADLWLLNSCTVKNPAEDHFRNSIKK
AQEQEKKVVLAGCVPQAQPRMDYLKGLSIIGVQQIDRVVEVVDEAVKGHSVRLLGQKKDG
GRRLGGARLDLPKIRRNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVERARQS
FQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWRLVEEIPEGAMLRLGMTNPPYILEHLEEM
AKILNHPRVYAFLHIPVQSASDSVLMDMKREYCIDDFKRVVDFLKERVPGVTIATDIICG
FPGETEEDFQETVDLVKCYRFPSLFINQFYPRPGTPAAKMEQVPAHVKKQRTKELSLLFH
SYNPYDHQVGERQHVLVTEESFDAQYWVAHNKFYEQVLVPKRDEFKGKMVEVDIYEAGKH
FLRGRPVDDSKLFTPSIAAPLQKGEVSGLVQEQISNGIQSCASTSSSSTLLIGSYSLDRE
ALKKLGIGLAVAAALLAFILEKVF
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccacctgtgacactctgattgaagacattgaagacatggtgtcttctagtgac
cccactcctcaagagagactaactgcaagaaagagcattataccaaggtccaggaagaga
aaagagctcctgaacaatgaggagctccaagctgacagtttaatccctgggacacagaag
atctggatgaaaacatggggctgcagtcacaacagctcagatggagagtacatggctgga
cagctggctgctagtggatacaagatgactgatgacccaacagaagcagacctgtggttg
ttgaacagctgtactgtgaagaacccggcagaggaccacttcagaaactcaatcaaaaaa
gctcaagaacaagagaaaaaggtggtgttagcaggatgcgttccccaggcccagccacgg
atggactacctcaaaggactcagcattattggggtccagcagattgatcgagtagtagaa
gtcgtggatgaggcagttaaaggccactcggttcggctgttaggtcagaagaaagatgga
ggccggaggctcggaggagcgagactggacctgcccaagatcaggaggaacccactcatt
gaaatcatctccattaacactgggtgtctgaatgcttgtacttactgtaagaccaagcat
gccagaggagacctggccagttatcccattgaggaactagtggagagagccagacagtct
ttccaggagggagtgtgtgagatctggttgaccagtgaagacacaggagcttatggccga
gacataggaacagatctgcccacattgttgtggagactggtggaggagattcctgaagga
gccatgctgaggctgggtatgaccaacccaccttatatcctggaacacctagaggagatg
gctaagatattgaatcatccacgtgtctatgccttccttcatattcccgtgcagtcggcc
tcagacagcgtactgatggacatgaagagggagtattgcatcgacgacttcaaaagagta
gtggacttcctcaaagagagggtcccaggtgtaaccatcgctactgatataatctgcggt
tttcctggtgagacagaggaagacttccaggagacggtagatttggtgaaatgctacaga
ttccccagtctcttcatcaaccagttctacccccgacctggtacacctgctgccaagatg
gagcaagtaccagcacatgtgaagaagcagaggactaaagaactgtctcttctcttccac
tcctacaacccatacgaccaccaggttggagagaggcaacatgtgttggtgacagaggaa
tcatttgatgcccaatattgggtggctcacaacaagttctatgaacaggtgctggttcct
aagagggatgagttcaaagggaagatggttgaggtggacatctacgaggcaggaaaacac
ttcctgagaggccggccagtagatgacagtaagctgttcaccccctccatcgcagcacca
ctacagaaaggagaggtgtctggcctggtgcaggaacagatctccaatggcatccaaagt
tgtgcttcgacttcctcttcgtccaccttgttaatcggctcctacagtctggacagggag
gctctgaagaagctggggatcggactcgctgtggctgctgctctcttggccttcatcttg
gagaaagtgttctga
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