Paralichthys olivaceus (Japanese flounder): 109642628
Help
Entry
109642628 CDS
T06037
Symbol
grin1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04020
Calcium signaling pathway
pov04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
109642628 (grin1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109642628 (grin1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pov04040
]
109642628 (grin1)
Ion channels [BR:
pov04040
]
Ligand-gated channels
Glutamate (ionotropic)
109642628 (grin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Ion_trans_2
SIP
Peripla_BP_6
DUF6724
DUF3663
Motif
Other DBs
NCBI-GeneID:
109642628
NCBI-ProteinID:
XP_019963050
LinkDB
All DBs
Position
Unknown
AA seq
749 aa
AA seq
DB search
MMVPVALRHRLLPCALVLQAEKVLLFSQDTNLTALLLEAKDLEARVIILSASEDEAAAVY
KAARQLNMTGSGYVWLVGEREMTGKALSEAPDGLLGLQLINGKNESAHITDAVAVVAQSL
QELFEKENITEPPRGCVGNTNIWRTGPLFKRVLMSSKYPDGLTGRIEFNDDGDRRFATYS
ILNYQQKPGRLVQVGVFNGSQVVMNPQRKIIWPGGETEKPVGYQMSTKLKIVTIHQEPFV
YVKPTKSDGTCKEEYTVNGVLIKKVICTGPNGTIPGQPTVPQCCYGFCIDLLIKLAMSMN
FTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINNERAQYIEFSK
PFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKV
NSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANL
AAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNY
ESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQN
VSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVGGGIVAGIFLI
FIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPEPKLKTSFRSITSTSDLKR
RRASGDATPYPTDITGQLNLSDPSVSTVV
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcctgttgccctgcgccatcgcctgttgccctgcgcgttggtccttcaggca
gagaaggtgctgctgttcagccaggacaccaacctgacggctctactgctggaggcaaaa
gacctggaggctcgggtcatcatcctctctgccagtgaggatgaggctgctgccgtctat
aaagcagctcgtcagctcaacatgaccggctctggttacgtctggttggtcggagagaga
gagatgactggcaaagctctgagtgaagctccagacggcctgctgggcctccagctgatt
aatggtaagaatgagtcggctcacatcacggacgccgtggcggtggtggctcaatctctg
caggagctgtttgagaaggagaacatcacggagcctccgaggggctgcgtgggaaacacc
aacatctggaggacgggaccgctcttcaaacgggtgctaatgtcatcaaagtaccctgat
ggtctgacagggcggattgagttcaacgacgatggcgaccgacgtttcgccacctacagc
atcctgaactaccaacagaaaccaggtcgcctggtccaggtcggagttttcaatggatcc
caggttgtgatgaaccctcagaggaagatcatctggcctggaggagagacagagaaacca
gttggataccagatgtcgactaaactgaagattgtcacgatccatcaggagccgtttgtt
tacgtgaagccgacaaagagtgacgggacatgtaaggaggaatacactgttaacggagtc
ttgatcaagaaggtgatctgtaccggacctaatgggaccattccaggtcagcccaccgtc
cctcagtgttgctacggtttctgcatcgacctgctcatcaaactggcaatgagcatgaac
ttcacctacgaggttcatctggtggctgatgggaaatttggcacgcaggagcgagtcaac
aacagtaacaaaaaggaatggaacgggatgatgggggagctgctggggggtctcgccgac
atgatcgtcgcccccctcaccatcaacaatgagcgtgctcagtatatcgagttctccaaa
ccctttaaataccaggggctcaccatcctcgtcaagaaggaaatccctcgcagcactctg
gattcattcatgcagccgttccagagcacactgtggctgttagtcggtctgtcggtccat
gtggtggcagtgatgctttacctattagaccggttcagcccatttggaaggtttaaagtg
aacagtgaagaagaagaagaagacgccctcaccctgtcctcggccatgtggttctcatgg
ggagtactgttgaattctgggataggagaaggagctcccaggagtttctcagcgaggatt
ctgggtatggtgtgggcggggtttgctatgataatcgtagcgtcatacactgccaacctg
gcagccttcctggtgctggaccggcctgaggagcgcatcactggcatcaacgaccccagg
ctgcgtaacccgtcagataagttcatctacgccacagtgaagcagagctcggtggatatc
tacttcagacggcaggtggagctgagcaccatgtacagacacatggagaaacacaactac
gagagcgctgctgaggccatccaggccgtcagagacaataagcttcatgccttcatctgg
gacagcgctgtgttagagttcgaggcatcgcagaagtgtgatctggtgacgacaggagag
cttttcttccgttctgggttcgggattggaatgagaaaagacagtccgtggaaacagaac
gtgtctctagctattctcagttctcatgagaacggcttcatggaggatttagacaagacg
tgggttcgttaccaagagtgtgactccaggagcaacgcccccgctacgctcacctttgag
aatatggcaggtgtgttcatgctggttggcggcggtatcgttgctgggatcttcctcatc
ttcatcgaaattgcatacaaacgtcacaaagacgcgcgaaggaaacagatgcagctcgcc
ttcgctgctgtcaacgtgtggaggaagaacctgcaggataggaaaagtggtagagcagaa
cccgagcccaaactgaaaacctcttttaggtccatcacttcgacctccgacctcaaacgc
cgtagggcctccggggacgccacgccgtacccgactgacatcaccggccagctcaaccta
tcagatccctccgtcagcaccgtggtctga
DBGET
integrated database retrieval system
