Paralichthys olivaceus (Japanese flounder): 109643617
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Entry
109643617 CDS
T06037
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109643617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109643617
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109643617
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
GAS
Fez1
Motif
Other DBs
NCBI-GeneID:
109643617
NCBI-ProteinID:
XP_019964345
LinkDB
All DBs
Position
Unknown
AA seq
2516 aa
AA seq
DB search
MAAVLLQVLERTELNKLPKGAQNKLEKFVTELQNANEALKTLHERFKADSEQQYFDIEKR
LLESQEQILSATRDLQTLKEENKKLNEELSTLKGIEGETFQDKTPQQQTKTKYEIEAEKR
ELARLLEKRTQEVENLTHDVNRLNEKLTETNKVRMELQLKLDDIQSSETSVQHREKRMEQ
EKELLEKKIEWSSAELKTKTEELLNTNRDKGKEILELQSSLKNTKEQVTALESQLMSLKQ
TSESQSKRADDLNNKLKQAKDEQSAMEEKYRNELNAHVKLSSLYKGAATDMETKNQELNR
AVEELSKVVKETGEANKTLEKKVFEGAELKTRLEAELREKIKKMEKELENATVKASGKHC
CVPSLTEEQLDHMCPSAAAIAAIVKPGMKFFDLYNAYAECQTQLQLEKQETRRVSRVLDE
IIQEVESKAPVLKRQRQEYESMQRSMASLCNKLEQARMEIHGLQKEKEETKQRCEALERE
KLRVERQLDDTSTQVCVLLAELEEAKGNRVIKNDSSSADISSTSEGISPRQVSFRSVEEM
QKQNQSLLGRLRELEQEKERQQSRVTSARVSELEASVDKLQKEVEQLKEQRNQQKQLADS
NARQRDMYKALLTHSTGFSLPPQGLESSPQPAHVRPSAPGTRSTPQRAAAVEAAQSTQAK
AALKQLNDAFSLYKKEKAENDRMLNETNDRLQRQITELSSSHAKLTSQLEFSNKRYEILQ
ETVSAYRREISALQDRNQKMSATAQRHEHIIHTMTQDLREANEKLALEEVRVANVTKERD
MLRQAESRLSREKEAIVAEQRNQNLLLTNLKTIQLTMERTETETRQRLNNKIEHLEAELV
SMKSRMDQEVAQRHSLGRTMDAQLLEAKKQLETQNILQQRTRELLRSSEQQVAALKAQLA
SASSSEAVTSSSNTTTTATRAAPLRAPLRVRPQAPAASQQPPSQSEQEIAEVKGLLRTAE
EQNSELAEQLKNANTTVEQYRAVVLTLEDSLKKEKESRSPLEMRLKESEEVQKQLEKRIV
EVEKMKQREQDEGRKAVDAVEKEVCELQRSLKTSQTEQQEALERAAASLTLEQKATQESL
LQTKLASEAQSKYERELMLHAADVEALQELKKKVQQDMAQKRELEEQINKTSSLLQEKTA
AWNTLEKQLKEDLSNQSRRCEELGKQNALLHQQMDDMASRSRQQQQQHQLDLSFNEEGKT
TEQILEILRFVRQEKQIAVARCEVSEGETLRYKQRVEHQDRELKELQDTLNAERQKMQAT
AKTLVQQEEQLKKMNTISALQESNKMLKMNRDKLQQELQQAQAKVTKLQSDISPLHNSMS
LLSKKNGSLQADKRLLEEDLKHWKAKAQLLASQRKDGDVEEKQKLTNEREAQQRRIAQLA
EEMAKLKTELARSSASSNSAQSQLQGLRDSMAQQISEKESLKKEAETKKNEILEKNKTIT
QVKKIGRRYKMQYDELKIQHDKLVAETASKAGSEAAPSQEVQQELAKAQEELNKAREELK
TLKEDVQKKQEETHKALQELEEAQTENQKTKEKSQEVQNQMTKIQNQLTQVQSQLSQTQS
QLQQNQNQLTQSQKELQQAKTHSQQVQNQLKSAQTQAQARQRELQQVKEALQQSLSGQKE
LQQTHQTNQHSHNQEVSNLKNTLTQAEGKATELQGQLDSLQKTIAERESDIKRLQEQLNE
ANQANEASQATQAKSSQASDANAAGDTNQAQQEEVAKLRQELLECKKREEQLKQQISDKE
EKTKKAFMGAKTKISQLISAKEQLSKETEELKQNKEELEGRVNALKSQYEGRILRLDREL
RELKETQTHSEPREEPQDQSGAKVVDQPRSTDQRQISLKSPAQDRGGSSLSDPPTANIRP
TPSTPSPSNKPSPSPGSKSTPRASIRPMVTPATIPIPTPTATVMPTTQIDSQEVLISTGV
SVHSTTSSLVSAPTSISQPTSLQATAFVQPTQQQAASQDAASSMDTERPSTSSSLIGAAG
SKRAREEEEEEQEEEDMERGPEISHTSPTTKKLRLKPSIVLEMEGDEEMEGELRDEGEQQ
DSPDDSQELPESFPVLAEDEEDIEEEGVSQSVPSYQMSSQGSTIIRDVIVIDTDSESRES
KEGEEKQEDEEEEEEEEEEEGDEYKEEEDDDEDEDDAGDGEMRGGDESNDRSGAEDEGEE
EDPSEATNAEEDVCGASSDSQHASEPPQSSEGSSSATSESDLREPVHLPPISSSIPSPSS
LTPRLPHPRRPTHSLPPRLYIQPPAPELGPPHTQRQSSQLRRTSVGRGLQLTPGISSTQH
FFDDDDRMVPSTPTLVVPHRTDGFAEAIHSPQVAGLSTRFRFGPPEDLLPQASASHSDLG
QLASQGGLGMYESPLFLAAHDEDGGGRSVPTTPLQVAAPVTVFTESLPSDSGDNMASQSV
PMVTASTGMASTADDVDEVFVEQEAEGPGIESSLESQTDVESTGQQSDDASLPSTSQDPD
NSSVTQRRMMSSQSLISSLSGRGTRGGRGEARMLLSRRGTYSRGGRGGAMGRGGIA
NT seq
7551 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtgctgctgcaggtcctggagcggacggagctaaacaaactcccgaaaggc
gcccagaacaagctggagaagtttgtgacggagctgcagaatgctaacgaggcgctgaag
acgctgcacgagcgcttcaaagcagacagtgagcagcagtactttgacatcgagaagaga
ctgttggagagccaggaacagatcctgtcagccaccagagacttgcagaccctgaaggag
gaaaataaaaaactcaatgaagagctgagtactctgaaaggaatagagggagagaccttt
caagataaaacaccacagcagcaaacaaagaccaagtatgagattgaggcagagaagagg
gagctggcgaggttgctggagaagagaacacaggaggtggagaaccttacacacgatgtg
aatcgtctaaacgagaagctgactgagacaaacaaagtgaggatggagctgcagttgaaa
ctggatgatatacaatcatctgagacgtcggtacagcatcgggagaagcgtatggagcag
gagaaagaattactggagaagaaaattgagtggtcatctgcagagctgaagaccaagacc
gaagaactgctcaacaccaacagagacaaaggcaaagagatactagagcttcagagtagt
ctgaagaacaccaaggagcaggtgaccgcactggaaagtcagctcatgtctctgaagcaa
accagtgagagccaaagtaaaagagctgatgacctcaacaacaaactcaaacaggctaaa
gatgagcagagtgccatggaggagaaataccgcaatgagctcaatgctcatgtcaagttg
tcttcactgtacaagggggcagcaacagatatggagacaaaaaaccaagaacttaacaga
gctgtggaagagctcagcaaagttgttaaagaaaccggggaggccaataagactctggag
aagaaggtgttcgaaggagcagaactgaagacacgacttgaggcagagctgagggaaaaa
atcaagaaaatggaaaaagagctggaaaatgccacagtgaaggcttctggtaaacactgc
tgtgttccctctctgactgaggagcagctggaccacatgtgtccgtcagcagctgccatt
gctgcgattgtaaagcctggcatgaaattctttgacctgtataatgcctatgcagagtgt
cagacgcagcttcagcttgagaaacaggagaccaggagagtgagccgagtgctggatgag
atcatccaggaagtggagtccaaagcgcctgtactgaaacgtcagagacaggagtatgag
agcatgcaaaggtccatggcttccctgtgcaacaaactggaacaggctcgaatggaaatc
catggtttgcaaaaagagaaagaagagaccaagcagcgctgtgaggcgttggagagagaa
aaactgagggtagagagacaattagatgacacatctacacaggtgtgtgttcttctggcg
gagcttgaggaagccaagggtaatcgggtgatcaagaatgacagcagctccgccgacatt
tccagcacttctgaaggcataagcccacgccaggtgtctttccgcagtgttgaggagatg
caaaagcagaaccagagcctgctgggaaggctgagggagctggagcaggaaaaggaaaga
cagcagagccgtgtgacttcagcacgtgtgtctgaattggaggccagtgtggataaactc
cagaaggaggtggagcagctgaaagagcagaggaaccagcagaaacagctggccgactcc
aacgccagacagagagacatgtacaaggccctgttgactcacagcactggctttagcctg
cctcctcaaggtcttgagtcttcaccccagcccgcacatgttcgtccttcagccccagga
actcgctctactccacaacgagctgctgctgtcgaggcagcacagagtactcaggctaaa
gctgctttaaaacagctcaacgatgccttcagtctgtataaaaaagagaaggcagagaac
gacaggatgctgaatgaaacaaacgacagactgcagagacagataacagaactcagctcc
agtcacgccaagctgacttctcaactggagttcagcaacaagaggtatgagattctccag
gagactgtatcagcttaccgcagagagatctctgcccttcaggacaggaaccaaaaaatg
tctgctacagcccaacgacacgagcacatcatccacacaatgacccaggatctgcgggag
gctaatgaaaaactggcactggaagaggtgcgcgtagcgaacgtgaccaaagagagagac
atgttaagacaagcagagagtcgactgagtcgagagaaggaagccatagtggctgagcaa
cgtaaccagaacctactgctcaccaacctcaagactatacagttgactatggagcgaaca
gagacagagacccgccagcgactgaacaacaagatcgagcatctggaggcagagctggtt
tccatgaagagcaggatggaccaggaagtcgcacagagacattccctcggacgcactatg
gatgctcagctgttagaagccaagaagcagcttgagacccagaacatcctgcagcagaga
accagggagttgttgcggagctctgaacagcaggtggcagcactgaaagcacagctggct
tctgcttcatcctctgaggctgttaccagctccagcaacaccaccaccacagctacccga
gctgcacccctcagagctccactgagagtacgccctcaagctccagcagcctcccagcag
cctcccagccaatccgagcaagagattgcagaggtgaaaggtcttctccgtactgctgag
gaacagaacagtgaactggcagagcagctgaagaacgccaatactactgtggagcagtac
agagctgtggtactgaccttggaagacagtctgaagaaggaaaaggagtcccgctccccc
ctggagatgcgactgaaggagtcggaggaggtgcagaagcagctggagaagaggattgta
gaggtggagaagatgaagcagcgggagcaggatgaggggaggaaagctgtggatgcggtg
gagaaagaagtgtgtgagctgcagcgcagtctgaagaccagtcagacagaacagcaggag
gcgctcgagagagcagctgcttctctgacactggagcagaaggccacacaagagagtctg
ctgcagactaagcttgctagtgaggcgcagtctaagtatgagcgggagttgatgcttcat
gctgctgatgtggaggctctgcaggagctcaagaaaaaagttcaacaagacatggcacag
aagagggagttagaggagcaaataaacaagacatcctccctcctgcaggagaaaactgct
gcatggaacacactggagaaacagctgaaggaggacctgtctaatcagagtcggcgctgt
gaggagctagggaagcagaatgctctcttgcaccagcagatggatgacatggcctccagg
agtcgccagcagcagcagcagcaccagcttgacctgtcatttaatgaggaaggaaagacc
actgaacagattctagaaatactcaggtttgtgcggcaggagaaacagatagctgtggct
cgatgtgaggtgtcggagggagaaactcttcgttacaaacagcgagtggaacaccaagac
agagaactaaaggagctacaagacaccctgaatgctgagaggcagaaaatgcaggctaca
gctaagactctggtccagcaagaagagcaactgaagaagatgaacactatcagtgctcta
caagaaagcaacaagatgctgaaaatgaacagagacaagctgcaacaggagctgcaacaa
gcacaggctaaagtgacaaagctgcagtcagacatcagtccactgcacaactctatgtct
ctgctgtcaaaaaaaaatggctccttgcaggctgataagaggcttctggaagaagacctc
aaacactggaaggccaaagcacagctgctggccagccaacggaaagatggagatgtggag
gagaaacaaaaactgaccaatgagagagaagctcagcagagacgcatcgcacagctcgct
gaagagatggccaagctgaagactgaactggccagatccagtgccagcagtaactcagct
cagtctcagctgcaaggcctcagagactctatggcccaacagatatcagagaaagaaagt
ctgaagaaagaagcggaaacaaaaaaaaatgagatcctggagaagaacaaaaccataacc
caggtgaagaagatcggacgacgctacaagatgcagtatgatgagctcaaaatccagcat
gacaagctggttgcagaaacagcatctaaagcagggagcgaggcagctcctagtcaagag
gtgcagcaggagctggctaaagcccaggaggagctcaacaaggccagagaggagctaaaa
acactgaaagaagatgtgcagaagaaacaggaagagacccacaaggccctgcaagagctg
gaggaggcacagacggaaaaccagaagaccaaggaaaagtcccaggaggttcaaaaccag
atgacaaagatccagaaccaactcacacaggtgcagtcccagttgtcgcagacccagtct
caactgcagcagaatcagaaccagctgacccagagtcagaaagagcttcaacaagcaaag
acgcacagccagcaggtacaaaaccagttaaaatcagctcaaactcaagctcaggcccgt
cagagggagctccagcaggtgaaagaagcactccagcagagcctctctggtcagaaagag
ctacaacagactcatcaaaccaatcaacacagccacaaccaggaagtcagcaatctcaag
aacactctaacccaagcagagggcaaggcgactgagctccaaggacagctggacagtctg
cagaagaccattgctgagcgtgaatcagacatcaagcgtctgcaggagcagctgaatgaa
gctaaccaggccaatgaagcgagtcaagccacacaggccaagagttcccaggccagtgat
gctaacgcagctggtgacactaaccaggctcaacaagaggaggttgccaaactcagacaa
gagcttttggagtgtaagaaaagagaggagcagctgaaacagcagatttctgataaagaa
gaaaagaccaagaaggcattcatgggagctaagaccaaaatcagccagctcatcagtgca
aaagagcagctaagtaaggagacagaagaacttaaacagaataaggaggagttggagggg
agagtaaacgccctcaagtctcagtacgaaggacgaattcttcgcctggacagagagctg
agagaactgaaggagacacagacacactctgagcccagagaggagccacaggaccagagt
ggcgctaaggtggttgatcagccgagatctacagaccagaggcagatatctttgaagagt
ccagcccaagacagaggaggctctagcctgtctgatcctcccactgctaacatccgccca
accccaagtactccatctcctagcaacaagcccagcccctcccctggtagcaagtccaca
ccccgtgccagtatccggcctatggttaccccggcaaccatcccaatcccgacacctacc
gccaccgtcatgccaaccacacaaattgacagtcaagaggtgctaattagtacaggagtc
tctgtacactccaccacctccagtctggtgagtgcacccacctccatatctcagccaacc
agcttacaagccacagcttttgtccagcccacccagcagcaggcagccagtcaggacgca
gcgtccagcatggacacagagcggccatccacgtcctcttctctgattggtgcagcaggc
tcgaagcgtgccagagaggaggaggaggaggagcaggaggaggaagatatggagagagga
ccagagatttcccacacatcaccgaccactaaaaaactacgactaaaaccatcaatagta
ctggagatggaaggtgatgaggagatggaaggagaactgagagatgagggggaacaacag
gattcaccagatgacagtcaggagcttccagagagtttccctgttctagctgaagatgag
gaggacattgaggaagaaggcgtgtcccagtctgtcccctcttaccaaatgtcctctcag
ggctccactataatccgagatgtcattgtgatcgacacggacagtgagagccgagagagc
aaagagggggaggagaagcaggaggacgaagaggaagaggaagaagaggaggaagaggaa
ggagatgagtataaggaggaagaggacgatgatgaagatgaggatgatgctggtgacggt
gagatgaggggaggagatgagagtaatgacaggagcggggctgaagatgagggagaggag
gaagatccatcagaagccaccaatgctgaggaggatgtgtgtggagcgtcgtcagactcc
cagcatgcctctgagccgccgcagagcagtgaaggcagcagcagcgccacatcagagtct
gacctcagagaacctgtacacctccccccaatctcctcctctataccctcaccctcctcc
ctcacaccccgtttgccacacccccgtaggcccacacactccctcccaccaaggctttac
atccaaccgccggctccagagctgggacccccacacacacagagacagtcctctcagctg
cgtagaacatcagtaggacgtggacttcaactcacccctggaatcagcagtacgcaacat
ttctttgatgatgacgacagaatggttcccagtactcccactctggtggtcccacaccgc
actgatggctttgctgaggctatacattcccctcaggtagctggtctctctaccaggttt
agatttggtcctccggaagacctgctgcctcaggcatcagcgtcacactctgacctcgga
caactggcctctcaaggaggtttggggatgtatgagtctcctctgttcctggctgctcat
gatgaagatggaggaggaaggagtgtccctaccacgcctttacaagtggctgcaccagtg
acagtcttcaccgagtcgctgccttcagacagcggtgacaacatggcctcgcagtctgtt
cccatggtgacagcctccacggggatggcttccactgcagatgatgtagatgaggtgttc
gtggagcaagaagcagagggacctggtattgagtcgtctttggaaagccagacagacgtg
gagtcaacagggcagcagagtgatgatgcatcactgccatctaccagccaagaccccgac
aacagcagtgttactcagcggcgcatgatgagcagccaatccctgatcagcagcctgtcg
ggcagaggaaccagaggagggaggggagaagccaggatgttactcagccgcagagggact
tactctcggggaggaaggggaggagccatgggcaggggaggcatcgcctaa
DBGET
integrated database retrieval system
