KEGG   Komagataella phaffii: PAS_chr1-4_0324
Entry
PAS_chr1-4_0324   CDS       T01092                                 
Name
(RefSeq) RNA polymerase I subunit A135
  KO
K03002  DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
Organism
ppa  Komagataella phaffii
Pathway
ppa03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ppa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PAS_chr1-4_0324
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppa03021]
    PAS_chr1-4_0324
Enzymes [BR:ppa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     PAS_chr1-4_0324
Transcription machinery [BR:ppa03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     PAS_chr1-4_0324
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_3 RNA_pol_Rpa2_4 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7
Other DBs
NCBI-GeneID: 8197774
NCBI-ProteinID: XP_002490446
UniProt: C4QY42
LinkDB
Position
1:2007927..2011424
AA seq 1165 aa
MKASFKTLERENRFKNPPTDKSAFPLLEQAVAPHIGSFNALTDGLNGGLLNLAVKDIGAK
TIFDSNDPSRLGNKLKIRVDAVQLAKPSVAVGDKLSVNRKTLPSECRERMITYKSRFMLK
VCWSVNDGPEETEIREAGQIPVMLKSNRCHLEKMSPNELVKNKEESDELGGYFIVNGIEK
LVRMLIVQRRNHPMALIRPSFGNRGDSYTQFGIQIRAVRPDQTSQTNVLHYLKDGNVTFR
FSWRKNEYLVPVPMILKALVETNDREIFDGIVGSETSNSFLTDRLELLLRNYKHYKLVSK
QETLAYLGDKFRVVFNATPDVSDVDVGKEVLRRIVLVHLPDNRDKFRLLLFMIRKLYALV
SGDCCPDNPDATQHQEVLLGGFLYGMIIKEKIEEYLASIRLQIQTDINRGYPVNFDEPKY
MSRVFQRINENIGKKLQYFLSTGNLVSQTGLDLQQVSGYTVVAEKINFYRFISHFRMVHR
GSFFAELKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCKISTEESDVSKVPKVL
SKLGVSANHVFAAGPQMCCVQLDGKIVGWCTHEQAKIVADTLRFWKVEGGHGIPLDLEVG
HVPPSSRGQYPGLYLFGGRARMTRPVRYLPLDKEDIIGPFEQAYINIAVTPEEIESNVHS
HVEFSPTNILSILANLTPFSDFNQSPRNMYQCQMGKQTMGTPGVALVHRSDNKLYRLQTG
QTPIVKANLYDDYGMDNFPNGTNAVVAVISYTGYDMDDAMIINKSSDERGFGYGTMYKVE
VIDLADSRRKGDPITQHFGFGTDEWPESWKQNLDEDGLPAIGTLVNEGDPIVAYYDDTLG
KTKVKTYHSSEPAYIEEVKLISDDLGDSELQMVTIKYRITRQPQIGDKFSSRHGQKGVCS
RKWPQIDMPFTETGIQPDVIINPHAFPSRMTIGMFVESLAGKAGALHGIAQDSTPWKFNE
DDTPADFFGEQLISAGYNYHGNEPMYSGVTGEELRADIYIGVVYYQRLRHMVNDKFQVRS
TGPVNSLTMQPVKGRKRNGGIRIGEMERDALIGHGTAFLLQDRLLNCSDYTQTSICKGCG
SLLNTQTSVPRIGTKAMIHCRRCSTKINDVTAGTTDDMDLWEDGQGNRYTGGNDTTTVAI
PFVLKYLDSELSAMGIRMRYNVEPS
NT seq 3498 nt   +upstreamnt  +downstreamnt
atgaaggcatcgttcaagactttggagcgtgagaatcgattcaagaacccgcctacggat
aaatcggctttccctttgttggaacaggctgtagctccacatatcgggtcgttcaatgct
cttactgatgggctcaatggtggattgttgaacttagcagttaaggatatcggagccaaa
accatatttgatagcaacgatccttcaagattaggaaacaaattgaagatacgagtagat
gcagttcagttggctaagccgtctgtggctgttggagataaattgtccgttaacaggaag
acactaccatctgaatgcagagagagaatgatcacatataaatccagattcatgctgaaa
gtatgctggtccgtcaacgatggcccagaagaaacagaaatcagagaggctggtcaaatt
cctgtcatgctaaagtcaaacagatgtcatcttgagaaaatgtcacccaatgaactggtg
aagaacaaagaggaaagtgacgagcttggagggtatttcattgtcaacggtattgaaaaa
ctagtcagaatgttgattgttcaaagaagaaaccatccaatggctcttattagacctagt
tttggaaacagaggcgattcttatacccaatttggtattcaaataagagctgtcagacca
gaccagacttcacagacaaatgttcttcattacttgaaagacggtaacgttaccttcagg
ttcagttggagaaagaatgagtatttggtccccgtccctatgattttgaaggccctagtg
gagaccaatgaccgtgaaatttttgacggtatagtgggctctgaaacttccaattcgttc
ttgactgatcgtttggaattactgttgagaaattataagcattacaagttagtttcgaaa
caggaaactttggcctatcttggagacaagttcagagtcgtctttaacgcaacacctgat
gtatccgatgtcgatgtgggtaaggaagtactgagaagaatcgtccttgtccatctaccc
gacaacagagataaattcagattgttactattcatgattagaaaactttatgcattagtt
tctggagattgctgccccgataatccagatgctacccaacatcaagaagtcttattggga
ggattcctttatggtatgattattaaagaaaaaattgaagaatacctggccagtattcga
ttacaaatccaaacagacattaatagaggctatccagtgaattttgacgaaccgaagtat
atgtctcgtgtttttcaaagaatcaatgagaatattggtaagaaactacagtatttcttg
tctactggtaacctggtttcccaaacgggattggatttgcagcaagtttcgggttataca
gttgtcgcagagaaaatcaacttctatagatttatctctcatttccgaatggttcataga
ggttcattctttgccgaattgaagacaaccacagttagaaaattacttccagaatcttgg
ggatttttgtgtcctgtgcacacaccagatggttctccatgtggtttattgaaccacttg
gctcacaagtgtaaaatatccaccgaagaatcggatgtttcgaaggtgcctaaagttcta
tcaaaactgggcgtatctgccaatcatgtttttgccgctggacctcaaatgtgttgcgtt
cagttagatggtaagatcgtgggatggtgtacacatgaacaggctaagatcgttgctgac
actttgagattttggaaagtggaaggtggtcatggcattcctcttgatttggaagttggt
catgttccaccttcttctagaggtcaatatcctggactatatctctttggaggtcgtgct
aggatgactagaccagtcaggtacctacctttggataaagaggatattattggccctttc
gaacaagcatacattaacatcgctgttactccggaagagattgaatccaatgttcatagt
catgtcgagttttctccaaccaacattttgtcaattcttgcgaatttaacgccattttct
gacttcaaccaatctccaagaaatatgtatcagtgtcagatgggtaagcaaaccatgggt
acacctggtgttgctttggttcatcgaagtgataataagctttatcgtctacaaacagga
caaactcctatagtaaaggctaatctttacgatgactatggaatggacaatttccccaat
ggaacaaacgcggtcgttgctgtcatttcatacactggttacgatatggacgatgcgatg
atcatcaataaatcgtcagatgaacgtggctttggttacggtaccatgtataaagttgaa
gtgattgatttagctgacagcagaaggaaaggtgatccaattactcaacactttggtttt
ggtactgacgagtggcctgaatcctggaaacagaatctcgatgaagacggattaccagct
attgggactctagttaatgagggagatcccatagtggcatactatgatgacacccttggt
aagaccaaggtgaagacttatcatagttcagagcctgcatacattgaagaggttaaactg
ataagcgatgatttgggagactcggaattgcaaatggtcaccattaagtacagaattact
agacaacctcaaatcggtgataaattctcctctagacacggacagaagggtgtctgttcc
cggaaatggcctcagatagatatgccatttactgaaactggaatacaacctgatgtcata
atcaatccgcacgctttcccatctcgtatgaccattggtatgtttgtggaatctctggct
ggaaaagctggagcattacatggaattgctcaggactctactccatggaagttcaatgaa
gatgatacgccggctgatttcttcggtgagcagctaattagtgccggttacaattaccac
ggtaatgagccaatgtattctggtgtcaccggtgaagaattgagggccgatatttacatt
ggagtggtctactaccaacggttgagacatatggttaacgataaattccaggtcagatct
acgggacctgtcaacagcttgacaatgcaaccagtcaagggacgtaagagaaacggaggt
attcgtattggagagatggaacgtgatgctcttattgggcacggtactgcgttcttatta
caagaccgtctgttgaactgttctgactacactcaaacatctatatgtaaaggctgtgga
tcgttattaaacacacaaacatccgttcctcgtataggcacgaaagccatgatccactgc
cgtcgttgttccacgaagatcaatgacgttactgccggaacgaccgatgatatggatctc
tgggaagatggacagggaaaccgatacactggaggcaacgatacaaccactgttgccatt
ccatttgtgcttaaatatttagactcagagctgtctgcgatgggtattcgtatgagatac
aatgtggaacccagttag

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