Komagataella phaffii: PAS_chr2-2_0243
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Entry
PAS_chr2-2_0243 CDS
T01092
Name
(RefSeq) Major karyopherin, involved in export of proteins, RNAs, and ribosomal subunits from the nucleus
KO
K14290
exportin-1
Organism
ppa
Komagataella phaffii
Pathway
ppa03008
Ribosome biogenesis in eukaryotes
ppa03013
Nucleocytoplasmic transport
ppa03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PAS_chr2-2_0243
03008 Ribosome biogenesis in eukaryotes
PAS_chr2-2_0243
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
PAS_chr2-2_0243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppa03019
]
PAS_chr2-2_0243
03009 Ribosome biogenesis [BR:
ppa03009
]
PAS_chr2-2_0243
03016 Transfer RNA biogenesis [BR:
ppa03016
]
PAS_chr2-2_0243
03036 Chromosome and associated proteins [BR:
ppa03036
]
PAS_chr2-2_0243
Messenger RNA biogenesis [BR:
ppa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
PAS_chr2-2_0243
Ribosome biogenesis [BR:
ppa03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
PAS_chr2-2_0243
Pre-60S particles
PAS_chr2-2_0243
Transfer RNA biogenesis [BR:
ppa03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
PAS_chr2-2_0243
Chromosome and associated proteins [BR:
ppa03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
PAS_chr2-2_0243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
BspA_v
Motif
Other DBs
NCBI-GeneID:
8198282
NCBI-ProteinID:
XP_002491952
UniProt:
C4R2E8
LinkDB
All DBs
Position
2:1935267..1938500
Genome browser
AA seq
1077 aa
AA seq
DB search
MEDILNFNKELDISLFDNVVNVLYNGSGKEQQQAQTIIAQFQEHEDSWTRADQILELSTN
SHSKYIALSTLDKLIKTKWKALGVEQRLGIRNFIISMIISMCEDDQVFVSQKALIQKCDL
TLVQIIKQDWPKNWPEFIPELIASSRASFNVCENNMVTLKLLSEEIFDFSSEQMTQAKAQ
ELKNSMSREFGEIFKLCFEVLDKAEKPSLLEATLNCLLKYIPWIPLGYIFETDLLNYLSE
KFFKDQQFRLTSLKCLTEVSAIRPTQEYEQYYLKYFKTILEALVTILPPDIDLRQSYEYA
NTTDQVFLNDLAMFFVTFLPNHVLSLEKDENLKQMSIVAHQYLINLSKISERELFKTCLD
YWNEFVSDLFSEVQKLPSKELSPLSQLQFSSSLGGGAPDPELLNQFPLRKHLYNKILSEL
RVVMIDNMVKPEEVLIVENDEGEIVREFVKESDTIQLYQSMREVLVYLTHLDAVDTENIM
REKLARQFMPSVWSWNRINCLCWAIGSISGTMNEKMERNFLVTVIKDLLALTDLKRGKDN
KAVVASNIMYIVGQYPRFLKAHWKFLKTVVNKLFEFMHESHEGVQDMACDTFIKITEKCK
RHFVIQQAGESEPFINEIILNLQSITEDLEPQQVHTFYEACGCILSAQENKDVRDKLLND
LMSLPNMAWNAIVQQAGADPTLLTNSETVKIIANIVKTNVSVCKTMGQGFYPQLILIYVD
MLSLYNAVSTMISNAVSTDGLIATKTPKVRGLRTIKKEILKLIEIYISKANNNQEIVRDL
IPPLLQAVLSDYNNNVPDARDSEVLNCMSTVVDKVGALIPNEILTILQNVFEVTLDMINK
DFTEYPEHRVEFYKLLREINRVNFNALLQLPTQAFQSFVDSILWAFKHNNREVEESGLTL
AVELLKNIQDLGNNDFATAFYQNFYFSILSDTFYVLTEPDHKSGFNLQSELLSKLIQLVT
ENIIAVPIYSPDQAPAGTSNLEFVRNYIGNMLMNAFPQLQEQQLVNFLDVAFKQYNLHTR
FKGVLRDFLVQIKQYGGDPTDYLFAEDKANELAEKKRAELEKAKQIGGLIKPSELDD
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggaagatatactcaactttaacaaggaattggacatctcgctgttcgataacgttgtg
aatgttctttacaacggatctggaaaggagcagcaacaagcacaaaccataattgctcag
tttcaagaacatgaggattcttggacaagggccgaccaaatcctggaactcagtacaaac
agtcatagtaagtacatagcactcagcactttagataagctaatcaagacgaaatggaag
gcgttaggagtggaacaacggctcggaattagaaactttatcatcagtatgatcatcagt
atgtgcgaagatgaccaggtgtttgttagccaaaaggcgttaatccaaaagtgtgaccta
acattggttcagattatcaaacaggactggcctaagaattggcctgaatttattccagag
ttaattgcgtcttcaagggctagtttcaacgtctgtgagaacaatatggtaactctgaag
ttgctgagtgaagagatttttgatttcagtagtgagcaaatgacacaggcaaaggctcaa
gagttaaagaatagcatgagtagagagtttggagagatcttcaaactgtgttttgaggtt
ctggacaaagcagagaagccctcgcttttggaggcaactttgaattgtttgctcaagtat
attccttggattcctctgggatacatcttcgaaacggatctactcaactatttgagtgaa
aagtttttcaaggatcaacagttcagactcactagtcttaaatgtcttactgaagtgagt
gcgattcgtcccacccaagaatacgagcaatactacctgaaatatttcaagaccattctc
gaagctttagtcactattctacccccagatatcgatttgagacaatcttacgaatatgct
aataccactgatcaagttttcctgaatgatttggctatgttttttgtcacatttttacca
aaccacgtgttgagcttagagaaagacgaaaacctcaaacaaatgtcaatcgtagcccac
cagtacctcatcaatctatcaaaaattagtgagcgtgagctgttcaaaacatgcttggat
tattggaatgaatttgtctctgacttgttctcagaagttcaaaaattaccttccaaagaa
ctatctcccttgtcacagctacaattttccagttcattggggggaggcgctccagatccc
gagcttttaaatcaatttccgctccgtaagcacctttataataagattctcagtgagctc
agagttgttatgattgataatatggtcaaaccagaagaggttctaattgttgaaaatgac
gaaggagaaatcgttcgtgagtttgtcaaagaaagtgataccattcaactttatcaatcc
atgagggaagttctagtgtacttgacccatttggatgctgtagacaccgagaacatcatg
agagagaaattggctaggcagtttatgccctccgtatggtcttggaacaggatcaactgt
ttgtgttgggccattggatctatttctggtaccatgaatgaaaaaatggagcgtaatttc
ctagttacagtcatcaaagatttgctggctttaaccgacttaaaacggggcaaagataac
aaagcagtggttgcttcaaatattatgtacattgttggccagtatcctcgtttcctgaaa
gctcattggaagtttttaaaaactgtggttaacaagctatttgagttcatgcatgaatct
catgaaggtgttcaggatatggcttgtgacacctttatcaagattactgaaaaatgtaag
agacatttcgtcatacaacaggcaggagagtcggaaccattcatcaatgagattattctc
aatctgcaatctatcactgaagatttggaacctcaacaggttcatactttctacgaggct
tgtgggtgtattctctcagcgcaagaaaacaaagatgtgagagataagttgttgaacgat
ctcatgagtttacccaacatggcatggaatgcaatagttcaacaggctggtgcagaccct
actttattgaccaactccgaaacagtgaaaatcatagcaaacatcgtcaaaacgaatgtt
tccgtctgtaagacaatgggtcagggattctacccacagttgatactaatctacgttgac
atgctttcattgtacaatgccgtgtcaaccatgatttctaatgcagtttcaactgacggc
cttattgctacaaaaacccctaaggttaggggattaaggactatcaagaaggagattttg
aagttgatagaaatttacatttccaaagccaataataaccaagagatagtgcgagacctg
attcctccattattacaagcagttttgagcgactacaataataatgttcctgatgctcgt
gattcggaggttctgaattgtatgtctaccgttgttgacaaagttggtgctttaatacct
aatgaaattctgactattctgcagaacgtatttgaggtaaccttagatatgatcaacaag
gacttcactgagtatccagaacatcgtgtggaattttacaagttattgagagagatcaac
agagtaaacttcaacgctttgttacaactgccaacccaggcattccagtcctttgtggac
tctatcttatgggccttcaagcataataatagagaagttgaagagtcaggattaacgctg
gctgtggaattgttaaaaaacattcaggacctaggtaacaatgattttgctacagccttc
tatcagaatttctactttagcattctgagtgacactttctacgtcctgacggagcccgat
cacaaatctggcttcaatttacaatcggagcttttgagtaaactgattcaactggtgacc
gagaatatcattgctgtaccgatctattcaccggatcaagctccagctggaacatccaac
ttggagtttgttcgtaattatattggaaacatgttaatgaacgcattccctcaattgcaa
gagcagcaactggttaacttccttgacgttgcattcaaacaatacaacctacacactaga
tttaaaggagtattaagagactttttggtgcagattaagcaatacggtggggatcctacg
gactatctgtttgctgaagataaagcgaacgagctggctgagaagaaacgggcagaatta
gagaaggcaaaacaaattggaggcttgattaaacctagtgaacttgacgactag
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