Pseudomonas paraeruginosa: B7D75_28555
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Entry
B7D75_28555 CDS
T08722
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ppaa
Pseudomonas paraeruginosa
Pathway
ppaa03030
DNA replication
ppaa03410
Base excision repair
ppaa03420
Nucleotide excision repair
ppaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B7D75_28555
03410 Base excision repair
B7D75_28555
03420 Nucleotide excision repair
B7D75_28555
03440 Homologous recombination
B7D75_28555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppaa03032
]
B7D75_28555
03400 DNA repair and recombination proteins [BR:
ppaa03400
]
B7D75_28555
Enzymes [BR:
ppaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B7D75_28555
DNA replication proteins [BR:
ppaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
B7D75_28555
DNA repair and recombination proteins [BR:
ppaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
B7D75_28555
NER (nucleotide excision repair)
GGR (global genome repair) factors
B7D75_28555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AVR70651
LinkDB
All DBs
Position
complement(6033405..6036146)
Genome browser
AA seq
913 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSTGKPTGAVKGVLNMLLSLRKQYPDSPFAVVFD
AKGPTFRDELFAEYKANRPSMPDDLRVQVEPLHASVRALGLPLLCVEGVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSRLDVDGVKEKFGVGPELIIDFLALM
GDKVDNIPGVPGVGEKTALGLLTGVGGGLEVLYASLDKVPELPIRGAKGLPAKLEENREQ
AFLSYQLATIKTDVELDVQLDQLYPGEPQREALIALYRELEFKNWLDDLLREAKEAGESG
EAETPIQAEVDYDVVLDQAGFDAWLKKLEQAELIAFDTETTSIDAQQAQVVGVSFAVKEG
EAAYVPLAHSYMGVPDQLERDAVLRALKPLLEDPQKLKVGQHAKYDINVLANASTPIAMQ
GVAYDTMLESYVLDSTATRHDMDSLALKYLGHSTIRFEDIAGKGAKQLTFDQIAIEQAGP
YAAEDADVTLRLHQALWQKLEAIPSLARVLTDIEMPLVPVLARIERNGALVDANLLGIQS
RELGEKMVALERQAYDLAGQEFNLGSPKQLGAILYDKLGLPVLSKTATGQPSTAEAVLAE
LAEQDFELPKVIMQYRSMSKLKSTYTDRLPEQINPRTGRIHTSYHQAVAATGRLSSSDPN
LQNIPIRTAEGRRIRQAFIAPQGYKLLAADYSQIELRIMAHLAKDEGLLDAFRHDLDVHR
ATAAEVFGVPLEDVSGDQRRSAKAINFGLIYGMSAFGLAKQIGVERKEAQAYIDRYFARY
PGVLAYMERTRAQAAEQGFVETLFGRRLYLPEIHSKNGAMRKAAERTAINAPMQGTAADI
MKRAMVSVDNWLRESGLDARVILQVHDELVLEVREDLVGQVREGIRPLMSGAASLDVPLV
VEAGIGSNWDEAH
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcgcccctcgtcctggtggacggttcctcgtacctgtaccgcgccttccat
gccctgccgccgctgaccacctcgaccggcaagcccaccggcgcggtgaagggcgtgctg
aacatgctcctgagcctgcgcaagcagtatccggacagcccgttcgcggtggtcttcgac
gccaagggcccgaccttccgcgacgaactgttcgccgagtacaaggccaaccggccatcg
atgcccgacgacctgcgggtccaggtcgagccgctgcatgccagcgtccgcgccctcggc
ctgccgctgctgtgcgtggaaggggtcgaggccgacgacgtgatcggcaccctggcgcgc
agcagtgccgcggccgaccgcccggtggtgatctccaccggcgacaaggacatggcgcaa
ctggtcgacgggcacattacgctggtcaacaccatgaccggtagccgcctcgacgtggat
ggcgtgaaagagaaattcggcgtcggtcccgagctgatcatcgatttcctcgccctgatg
ggcgacaaggtcgataacattcccggcgtccccggggtcggcgaaaagaccgcgctgggc
ctgctgaccggcgtcggcggcgggctggaggtgctctacgcgagcctggacaaggtaccc
gagctgccgatccgcggcgccaagggcctgccggcgaaactggaggagaaccgcgagcag
gcgttcctttcctaccaattggcgaccatcaagaccgatgtcgaactcgacgtgcagctc
gaccagctgtatcccggcgaaccgcagcgcgaggcgctgatcgccctgtaccgcgagctg
gaattcaagaactggctcgatgacctgctgcgcgaggccaaggaggccggcgagagcggc
gaggcggagacgccgatccaggccgaggtcgactacgacgtggtgctcgaccaggccggt
ttcgacgcctggctgaagaagctcgagcaggccgagctgatcgccttcgataccgagacc
accagcatcgacgcccagcaggcgcaggtggtcggcgtatccttcgcggtgaaggagggc
gaggccgcctacgtgccgctggcccacagctacatgggcgttcccgaccaactggagcgt
gacgcggtgctgcgcgcgttgaaaccgctgctggaggatccgcagaagctcaaggtcggc
cagcacgccaagtacgacatcaatgtcctggccaatgccagcacgcccatcgcgatgcag
ggcgtggcctacgacaccatgctcgagtcctatgtgctggactccaccgccacccgccac
gacatggacagcctggccctgaagtacctcggccacagcaccatccgtttcgaggacatc
gccggcaagggcgccaagcaactgaccttcgaccagatcgccatcgaacaggccgggccc
tacgccgcggaggacgccgacgtcaccctgcgcctgcaccaggctctgtggcagaagctg
gaagccattccttccctggcccgggtcctgaccgatatcgagatgccgctggtgccggtg
ctggcgcggatcgagcgcaacggcgcgctggtcgacgccaacctgctgggcatccagagc
cgcgagctgggcgagaagatggtcgccctggagcgccaggcctatgacctggccgggcag
gagttcaacctcggctcgcccaagcagcttggcgcgatcctctacgacaagctcggcctg
ccggtgctgagcaagaccgccaccggccagccgtccaccgccgaggcggtgctcgccgaa
ctggccgagcaggacttcgagctgcccaaggtgatcatgcagtaccgctccatgagcaag
ctcaagagtacctacaccgaccgcctgccggagcagatcaacccgcgcaccgggcgcatc
catacctcctaccatcaggcggtggcggctaccgggcggttgtcgtcgagcgatccgaac
ctgcagaacatcccgatccgcaccgccgagggccggcgcatccgccaggcgttcatcgcg
ccgcagggctacaagctgctggcggccgactactcgcagatcgaactgcggatcatggcc
cacctggccaaggacgaaggcctgctggacgccttccgccacgatctggacgtacaccgc
gccaccgcggcggaagtcttcggcgtgccgctggaagacgtcagcggcgaccagcgacgc
agcgccaaggcgatcaacttcgggctgatctacggcatgagcgccttcggcctggccaag
cagatcggcgtcgagcgcaaggaagcccaggcctacatcgatcgttacttcgcccgctac
cccggggtgctggcgtacatggagcggacccgcgcgcaggccgccgagcagggcttcgtc
gagaccctgttcggccgccgcctgtacctgccggaaatccattcgaagaacggcgccatg
cgcaaggccgcggagcggacggcgatcaacgcgccgatgcagggcactgcggcggacatc
atgaagcgcgccatggtctctgtggataactggctgcgggaaagcggcctggatgcccgg
gtaatcctccaggtgcacgacgaattggtgctggaggtacgcgaggacctggtcgggcag
gtgcgcgaggggattcgcccgctgatgagcggggcggcgtccctggacgtaccgctggtg
gtcgaggcgggcatcggttcgaactgggacgaagcccactga
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