Paenibacillus pabuli: KET34_00585
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Entry
KET34_00585 CDS
T09669
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
ppab
Paenibacillus pabuli
Pathway
ppab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ppab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KET34_00585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppab03021
]
KET34_00585
03400 DNA repair and recombination proteins [BR:
ppab03400
]
KET34_00585
Transcription machinery [BR:
ppab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KET34_00585
DNA repair and recombination proteins [BR:
ppab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KET34_00585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
BUD22
Mnd1
MetOD2
CMD
Motif
Other DBs
NCBI-ProteinID:
UPK44139
LinkDB
All DBs
Position
127663..128238
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AA seq
191 aa
AA seq
DB search
MSTSLNLKIDKEKVREIPLVDLAFMVLKAANTPYYYRDLMNEVAKQRGMTDEEINEFIAQ
LYTEINIDGRFACVGTSLWGLKRWYPVAGSEDTMTGAKRPRIINDEDDDLEDEDFGEEED
SYNSDEDFDNSDDDQDDDDDDDDDDEDDIFDEEDGDEEVLVEDDDLEEEDLDEDDEEESE
DEDEFDDDSDK
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
gtgagtacctcgctcaatttgaagattgataaagaaaaggtaagagagattcctttggtg
gacctcgcctttatggtgctgaaagcggctaatacgccgtattactaccgtgatttgatg
aatgaggtagctaaacagcgcggaatgactgatgaagaaatcaacgagtttatcgcccag
ctatatactgagattaatatcgatggccgttttgcttgcgtcggtacaagtctgtggggc
ttgaagcgctggtatcctgtagctggatcggaagataccatgacgggtgcgaagcgtccg
cgtatcatcaacgatgaagacgatgatctggaagacgaagacttcggcgaagaggaagac
agctacaacagcgacgaagacttcgataattctgacgatgatcaggatgacgatgatgac
gacgatgatgatgacgaagacgacatctttgatgaagaagatggcgatgaagaagttctg
gttgaagatgacgatttggaagaggaagacctcgatgaagacgatgaagaagagtccgaa
gacgaggatgaatttgacgacgattccgataagtaa
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