Palaeococcus pacificus: PAP_02710
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Entry
PAP_02710 CDS
T03210
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
ppac
Palaeococcus pacificus
Pathway
ppac03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ppac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PAP_02710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppac03021
]
PAP_02710
Enzymes [BR:
ppac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PAP_02710
Transcription machinery [BR:
ppac03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
PAP_02710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
RUBY_RBDX
Auto_anti-p27
NOB1_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
AIF68964
UniProt:
A0A075LRK3
LinkDB
All DBs
Position
464745..468101
Genome browser
AA seq
1118 aa
AA seq
DB search
MRGPTVVEVNPDDLWYVMESYWQEKGLVRQHLDSYNAFLDHGLQDVVNEFGGVKPDIPNF
EVKFGKIRIGEPEFQEPQGQRKPLYPLDARIRNLTYAAPVFLEMIPVVNGIEQESVEVRI
GELPIMLKSKACRLHGMSDDELRKIGEDPKDPGGYFIINGSERVIVSIEDLAPNRTLVEK
DESNNRYIAKCFSYRHGYRALIQVEKRKDGIVYVSMPNVPGLVKFVVVMRALGLESDKEI
VEAVSDDPEIQKELLENLDDASDILTQEEALDFIGKKALPGQPREYRIRRAQNIIDNNLL
PHMGVSPEDRIKKAYYLGMMALKVLELSLGLRGEDDKDHYANKRLKLAGDLLKDLFRVAF
GQLVKDMQYQLTKTYQRKGEKYVFENVQRFVRHSVRPDVLSERIEHAMATGAWPGGRTGV
SQLLDRTNYMSTLSHLRRVTSPLSREQPHFEARDLHGTHWGRICPTETPEGPNCGLVKNL
ALMSQITTAVPEEEVLEYLRKLGVMTILERRPNPHVWRVYLNGVLMGTIEDGIELVTRIK
EDRRKGKINDVINVAYYEDVKEVYVNSDDGRVRRPLIIVEKGEPKLKKEHVEAIKNGKLT
WSDLVKQGIIEYLDAEEEENAYVALWPWEITEEHTHLELMPAAILGLPASLVPYPEHNAA
PRNTYGAGMAKQSLGLGWANFRLRVDTRGHLMHYPQVPLVNSRVMGAVGFEERPAGENFV
VAVLSYQGYNMEDAIIMNKASIDRGLARSTFFRTYESEEKKYLGGQTDHFEIPDPTVRGY
RGEQYYRHLDEDGIIFPESKVRGKDVLVGRTSPPRFLEEQTGLGGIILQERRETSEAVRH
SEKGIVDKVIVTESGDGTKLVKVTVRDLRIPEIGDKFASRHGQKGVIGLIVPQEDMPWTE
SGIVPDLIVNPHGIPSRMTVGQLLEAIGGKVASLKGRRIDGTAFIGEPEEKLRKELEELG
FKHNGREVLYDGITGRRLEADIFVGVIYYQRLHHMVADKMHARSRGPVQVLTKQPTEGRA
REGGLRFGEMERDVLIGHGAAMLIVERLLEESDKSEVWVCENCGHLALEDKRRDQVYCPV
CGETESISKVEMSYAFKLLLDELKAMVIRPKLRLKDRV
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgaggggtcctactgttgttgaggttaatccggatgacctttggtatgttatggaaagc
tattggcaagaaaaaggtcttgttagacagcacttagattcatacaatgcattcctagac
cacgggcttcaagacgtagtcaacgagtttggtggagtaaagccagatattcctaacttt
gaggttaagtttggaaagattagaattggagaaccagagtttcaagagccacaaggacaa
agaaagccactttatcccttggatgctagaattaggaacttaacctatgcagccccagtg
ttcttagaaatgatacctgttgtcaacggcattgagcaggagtctgttgaggtaaggatt
ggcgaactcccaataatgctcaaatctaaagcttgcaggctccacggtatgagcgacgac
gagttgaggaaaattggagaagacccaaaagacccgggaggatactttattatcaatggt
tcagagagagttatagtgtccattgaggatttagcaccaaataggactctggttgaaaag
gacgagtcaaacaaccgctatatagctaagtgtttctcatacaggcatggatacagggct
ttaattcaagttgagaagaggaaggatggaattgtatacgtttctatgccgaacgtccct
ggtcttgtgaagtttgttgttgtgatgcgtgctttgggtcttgaaagtgataaagaaatc
gttgaagctgtttctgatgatcctgaaattcaaaaggagcttttggagaacttggacgat
gcttctgacatcctgacccaagaggaggctttggactttattggaaagaaagctttgcca
gggcagccaagggagtacaggattaggagagctcaaaacatcatagacaacaaccttctc
ccgcacatgggcgtttcacccgaagacaggattaaaaaagcttattacttaggaatgatg
gccttaaaggttctcgagctctcacttggcttgagaggggaagatgacaaggatcactac
gccaacaagagattaaagctcgctggtgatttgctaaaggatctctttagagttgcattt
ggccaattggttaaggacatgcagtaccaattaacaaaaacataccaaagaaaaggcgag
aagtatgtctttgagaatgtgcagaggtttgttaggcactccgttagaccagacgtttta
agtgagagaattgagcacgcaatggccacaggtgcttggccgggtggaaggacgggtgtg
agccagctattggatagaacaaactacatgtcaacgctctcacacttgagaagggttact
tcacctttgagcagagagcagccacacttcgaagctcgtgatttgcacggaactcactgg
ggaagaatttgtcctaccgaaacacccgaaggtccaaactgtggtctcgttaagaactta
gctttaatgtctcaaataaccactgctgtgcctgaggaagaagtcctcgagtacttgagg
aagcttggggttatgacaatcctggagagaaggccaaatccacacgtttggagagtttac
cttaacggtgttttaatgggcacaattgaggacggcatcgagctggttacgaggattaag
gaagataggagaaaaggaaagataaatgacgtcatcaacgttgcctactatgaggatgtt
aaggaagtttatgtaaacagtgatgacggtagagtcagaaggcccctaatcatagtggag
aagggagagccaaagctcaagaaggagcatgttgaggcaattaagaatggaaagctcact
tggagtgacttagttaagcagggcatcatagagtacctcgatgcagaggaagaagaaaac
gcatatgtggccctttggccgtgggaaattaccgaagagcacactcaccttgagttgatg
cccgcagccatattaggtctcccagcatctctagttccatacccagagcacaatgccgct
ccaagaaatacctatggagccggtatggcaaagcagagccttggtttgggatgggctaac
tttaggcttagggtagatacaagaggtcacttaatgcactacccacaagttccattagtt
aactcaagggtcatgggtgccgtcggttttgaggagaggcctgctggagagaactttgtc
gttgctgtcttgagctatcaaggatacaacatggaagatgccatcatcatgaacaaggct
tcaatcgataggggtttagcaaggagcactttcttcagaacctatgaatcagaggagaag
aagtacttaggtggacaaacagaccactttgagatccccgacccaacagttagaggatat
agaggagagcaatactacagacacttggatgaggacggtataatcttcccagaatcaaag
gttagaggtaaagatgttttggttggtaggacatctccaccaagattccttgaggagcaa
actgggttgggcggaataatcctccaagagcgcagggagacaagtgaagcagttagacac
agcgagaaaggtatagttgataaggttatcgttacggagagtggagatggaaccaagctc
gttaaggtaaccgttagggacttaagaataccagagattggagacaaattcgcctcaaga
cacggacagaagggtgtcattggtttgatagttccacaagaggacatgccatggacagag
agcggtatagtccccgacttaatcgttaacccacacggtatcccatctcgtatgactgtt
ggacagctcttagaggctataggtggaaaagttgcttcactcaagggaaggagaatcgat
ggaactgccttcattggtgagccagaggagaagcttaggaaagagcttgaagagcttgga
ttcaagcacaacggaagggaagttctctacgatggtataaccggtagaagattagaggcc
gatatatttgtgggtgttatttactaccagagactccaccacatggttgcggataagatg
cacgctcgttcaagaggtccagtgcaagtccttacaaagcagccaaccgaaggaagggca
agagagggaggtcttagattcggtgagatggagcgtgatgttctaataggccacggtgca
gcaatgctcatagtagagcgtctccttgaggagagcgataagagcgaagtgtgggtatgt
gagaactgcggtcacttagcattggaggacaagagaagggaccaagtttactgtccagta
tgcggtgaaacagaaagcataagcaaagtagagatgagttatgcattcaaattgctcctg
gatgagcttaaggctatggtaataagaccaaaattaagattgaaggatagggtgtga
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integrated database retrieval system
