Pseudomonas palleroniana: LDL65_11535
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Entry
LDL65_11535 CDS
T09728
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ppae
Pseudomonas palleroniana
Pathway
ppae03030
DNA replication
ppae03410
Base excision repair
ppae03420
Nucleotide excision repair
ppae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LDL65_11535 (polA)
03410 Base excision repair
LDL65_11535 (polA)
03420 Nucleotide excision repair
LDL65_11535 (polA)
03440 Homologous recombination
LDL65_11535 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppae03032
]
LDL65_11535 (polA)
03400 DNA repair and recombination proteins [BR:
ppae03400
]
LDL65_11535 (polA)
Enzymes [BR:
ppae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LDL65_11535 (polA)
DNA replication proteins [BR:
ppae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LDL65_11535 (polA)
DNA repair and recombination proteins [BR:
ppae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LDL65_11535 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LDL65_11535 (polA)
BRITE hierarchy
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
UOP13152
LinkDB
All DBs
Position
2458750..2461533
Genome browser
AA seq
927 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDDMYAEYKANRPSMPDDMRLQIEPLHQSVIALGFPLLCVEGVEADDVIGTLAR
SSAAANRPVVISTGDKDMAQLVDGHITLVNTMTGSSMDIEGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGIKELYEQLDIVPTLPIRGAKTLPAKLEEHKEM
AFLSYQLATIKCDVPLHVGLEDLHLIEPDREKLLELYTLLEFKSWFDEIQRDAKRVELNT
APVAEAVVEAVVVAPVEARYTTILDQATFDTWLQKLNDAKLFAFDTETTGIDAQQAQLVG
VSFAVQPHEAAYIPLTHSYIGAPPQLDRDSVLLALKPLLEDPTKLKVGQHAKFDMNILAN
CAIGGDPTQGITVRGIAFDTMLESYVLNSTATRHDMDSLAKKYLDYDTVSFQDIAGKGAK
QLTFDQIPLEQAGPYAAEDADVTLRLHQALHAQLAAIPSLTGVLTDIEIPLVPVLARIER
QGALVDKDLLGVQSIELGDKMVELERQAFEIAGEAFNLGSPKQLGAILYEKLGLPVLKKT
GKGQASTAEEVLAKLAEDDFLLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGRIHTSYHQ
AVAATGRLSSSDPNLQNIPVRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLSRDE
GLMNAFRNNLDVHTATAAEVFKVELAEVTSDQRRSAKAINFGLIYGMGAQKLGKDIGVDT
KTAKAYIDVYFARYPGVREYMERTRAQAADQGYVETFFGRRLYLPDINSNKPQDRAAAER
TAINAPMQGTAADIIKKAMVRVDDWLTESGLDAKVILQVHDELVLEVREDLVAQVSEKIR
EHMSAAAQLDVPLVVDVGVGNNWDEAH
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcccccctcgtcctggtggacggttcttcttatctgtatcgcgcgttccac
gcgctgccaccgctcaccacttccaaaggcctgccgaccggtgcggtcaagggcgtgttg
aacatgctcaaaagcctgcgcaagcagtacccggacagccctttcgccgtggtgtttgac
gccaagggtgggacttttcgcgatgacatgtacgccgaatacaaggccaatcgcccgagc
atgcccgatgacatgcgcctgcagatcgagccgctgcaccagagcgtgattgccctgggc
ttcccgctgttgtgcgtcgaaggcgtcgaggccgatgacgtgatcggcaccctggcccgc
agtagcgcagcggccaaccgaccggtggtgatttccacgggtgacaaagacatggcgcag
ctggtcgatgggcacattaccttggtcaataccatgaccggtagttcgatggacatcgaa
ggcgtaaaggagaaatttggcgtcgctccggagcagatcatcgactatctggcgttgatg
ggggattcgtctgacaacattccgggcgttccgggtattggtccgaagaccgcttccggc
ttgctggtgggcgtgaatggtgggatcaaagagctgtatgagcagttggatatcgtgccg
accctgccgatccgtggggccaagaccctgccggccaagttggaagagcataaggagatg
gcattcctttcttaccaactggcgacgatcaaatgtgatgtgccgctgcacgtcggcctg
gaagacctgcacctgatcgaacccgatcgtgaaaagctgctggagctgtacacgctgctg
gagttcaagagctggtttgacgagatccagcgtgatgccaagcgcgtggaactcaacacg
gcgcccgttgctgaggccgtcgtggaggcggtggtggttgcacctgtcgaggcgcgttac
accacaatccttgaccaggcgaccttcgatacctggctgcagaagctcaatgacgcgaag
ttgttcgcgttcgataccgaaaccaccggcatcgacgcccagcaggcgcagctggtcggg
gtttcattcgcggtgcagccccatgaagccgcgtacattccgttgacgcattcctacatc
ggcgcgccgccgcagttggatcgcgacagcgtgttgctcgcgttgaaaccattgctggag
gatccgaccaagctaaaggtcggccagcacgccaagttcgacatgaacatcctggccaac
tgcgccatcggcggcgacccgacgcagggcattaccgtacgtggtatcgccttcgacacc
atgctcgaatcctatgtgctcaactccacggcaacccggcacgacatggacagcctggcc
aagaagtacctggactacgacaccgtcagtttccaggacatcgccggcaagggcgccaaa
cagctgacattcgaccagatcccgcttgaacaagccggtccctacgcggcggaagatgcc
gatgtgaccttgcgtctgcatcaggcgctgcatgcgcaactggcggccattccaagcctg
accggcgtactgaccgacatcgagattccgctggtgccggtgttggcgcggatcgagcgt
cagggagccttggtggataaggatctgctgggcgttcagagcatcgagctgggcgacaag
atggtcgagctggagcgtcaggcgttcgagatcgccggtgaggcgttcaacctgggctcg
cccaagcagctaggggcgattctctacgagaaactgggcctgccggtactgaagaagacc
ggcaaaggccaggcgtcgactgctgaagaagtactggccaagctggccgaagatgacttc
ctgttgcccaaggtgctgatgcagtaccgcagcatgagcaagctcaaaagcacctatacc
gaccggctgccggagcagatcaacccacgcaccgggcgcattcacacgtcttatcaccag
gcggtggcggcaaccgggcgtttgtcttccagcgatccgaacctgcagaacataccggtg
cgcaccgccgaagggcggcggattcgccaggcatttgtcgcgcccaagggctacaaactg
ctggcggcggattattcccagatcgaattgcggatcatggcgcacttgtccagggacgag
ggcctgatgaacgccttccgcaacaacctggacgtgcacacggccacggccgccgaggtg
ttcaaggtcgagttggccgaggtcacgtccgaccagcgtcgcagtgccaaggcgatcaac
tttggcctgatctatgggatgggggcacagaagctcggcaaggatatcggggtcgatacc
aagactgccaaggcctatatcgatgtgtacttcgcacgttacccgggcgttcgcgaatat
atggagcgcacccgcgcccaggctgccgaccagggttatgtagaaaccttcttcgggcgt
cggctgtatttgcccgacatcaactccaataaaccccaggaccgcgcagccgccgagcgc
acggcgatcaacgcgccgatgcaaggtactgcggcggacatcatcaagaaagccatggtg
cgggtggatgactggctgacggagtcgggtctggatgccaaggttatcctccaggtgcac
gacgaactggtacttgaggtgcgtgaagacctggtggcgcaagtcagcgaaaagatccgc
gaacacatgagtgcggcggcgcaattggatgtgccgttggtggtggatgtgggagtgggc
aataactgggacgaggcgcactga
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