Pseudomonas palleroniana: LDL65_12965
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Entry
LDL65_12965 CDS
T09728
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
ppae
Pseudomonas palleroniana
Pathway
ppae00730
Thiamine metabolism
ppae01100
Metabolic pathways
ppae01240
Biosynthesis of cofactors
ppae04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
ppae00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
LDL65_12965 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
LDL65_12965 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppae03016
]
LDL65_12965 (thiI)
Enzymes [BR:
ppae01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
LDL65_12965 (thiI)
Transfer RNA biogenesis [BR:
ppae03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
LDL65_12965 (thiI)
BRITE hierarchy
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
UOP13419
LinkDB
All DBs
Position
2805844..2807298
Genome browser
AA seq
484 aa
AA seq
DB search
MKLIVKVFPEITIKSRPVRTRFIRQLAKNIRAVLRDLDPAVVVNGVWDNLELETRVTDAK
ALKDMTERLSCMPGIAHFLQVDEYPLGDFDDITEKCKQHYGSSLEGKIFSVRCKRAGKHP
FSSMDVEKYVGSKLRRECGAAGISLKTPEIEVRIEIRDQRLFVIHSQHNSIGGYPLGALE
QTLVLMSGGFDSTVAAYQIMRRGLMSHFCFFNLGGRAHELGVMEVAHFIWKKYGSSQRVL
FVSVPFEEVLGEILGKVDNSHMGVVLKRMMLRAASSIADRLHIDALVTGEAISQVSSQTL
PNLSLIDCVTEKLVLRPLIASHKQDIIDLAQEIGTADFARHMPEYCGVISVNPKTHAKRH
RVEHEEKEFDMAVLERALENAKLVPIDRVIDELGQDVQIEEVSEALAGQIVIDIRHPDAA
EDEPLEIAGIDVQTLPFYALNARFKELDDSRQYLLYCDKGVMSRLHAHHLLSEGHANVRV
YRPS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaatcgttaaagtcttccccgagatcaccattaaaagccgaccggtacggacg
cgtttcatccgtcaattggccaagaacatccgtgccgtgctccgtgacctggacccggct
gtggtggtgaatggcgtgtgggacaatctcgagctggaaacccgtgtcaccgacgccaag
gccttgaaagacatgaccgagcgcctgagctgcatgccgggcatcgcgcatttcctgcag
gtggatgaatacccgctgggcgacttcgacgacatcaccgaaaagtgcaagcagcactac
ggcagttcgcttgaaggcaagatcttttctgtacgttgcaagcgtgccggcaagcatccg
ttcagctccatggatgtcgagaaatatgtcggcagcaagctgcgtcgtgaatgcggcgca
gccggaatttcgctgaaaacgccggaaatcgaagtccgaatcgaaattcgcgaccaacgg
ttgtttgtcatccacagccagcacaacagcatcggcggctacccactgggcgccctggaa
cagaccctggtattgatgtccggcggtttcgattccacggtggcggcctaccagatcatg
cgccgcggcctgatgagccacttctgcttctttaacctgggcgggcgtgcacacgaattg
ggcgtgatggaagttgcgcactttatctggaagaaatacggcagctcccaacgcgtgcta
tttgtaagcgtaccgttcgaggaagtgctgggcgaaattctcggcaaagtcgataacagt
catatgggcgtggtattgaagcgtatgatgttgcgcgccgcgtcgagcatcgccgaccgc
ctgcacatcgacgcgctggtgaccggcgaggcgatctcccaggtttcgagccagacgctg
ccgaacctgtcgctgatcgattgtgtgaccgaaaagctggtattgcgcccactgatcgcc
agccacaagcaggacatcatcgacctggcgcaagaaatcggcaccgccgactttgccagg
catatgcccgagtactgcggggtcatctcggtgaaccccaagacccatgccaagcgccac
cgcgtggagcatgaagagaaagaattcgatatggccgttctggagcgtgcgctcgagaac
gccaagctggtgccgatcgatcgcgtaatcgatgaattgggccaggatgtacagatcgaa
gaagtcagcgaggctctggccggccagatcgtcatcgacatccgtcacccggatgccgct
gaagatgaaccgttggaaattgctggcatcgacgtgcaaacgctgccgttctacgcactg
aacgcgcgtttcaaggaactggatgacagccgtcagtacctgctgtattgcgacaaaggc
gtgatgagtcgcctgcatgcccaccatttgctcagtgaggggcatgccaatgtgcgcgtt
tatcgaccgagctaa
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