Pseudomonas palleroniana: LDL65_17205
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Entry
LDL65_17205 CDS
T09728
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ppae
Pseudomonas palleroniana
Brite
KEGG Orthology (KO) [BR:
ppae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppae03009
]
LDL65_17205 (rimO)
Enzymes [BR:
ppae01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LDL65_17205 (rimO)
Ribosome biogenesis [BR:
ppae03009
]
Prokaryotic type
ribosomal protein modification factors
LDL65_17205 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
DUF730
Motif
Other DBs
NCBI-ProteinID:
UOP08833
LinkDB
All DBs
Position
complement(3749123..3750463)
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AA seq
446 aa
AA seq
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MSTTPATANPKVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDS
AKAESLEVIGEAIKENGKVIVTGCMGVEEGNIRNVHPSVLAVTGPQQYEQVVNAVHEVVP
PKQDHNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDE
AQRLVKSGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSSLGVWVRLHY
VYPYPHVDELIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDKTLARIKNWREICPE
LIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANLLDLAVVPDDVK
QDRWERFMAHQQAISSARLQLRIGKEIEVLIDEVDEQGAVGRCFFDAPEIDGNVFIDDAS
GLKPGDKVWCTVTDADEYDLWAEKRD
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccactcccgcaacggccaatcccaaggtcggctttgtttccctgggttgcccg
aaggcgctcgtagactccgagcgcatcctgacgcaactgcgcatggaaggctatgacgtg
gtgtccacttatcaggacgccgacgtagtggtggtcaacacctgcggtttcatcgactcg
gccaaggccgaatccctggaagtgatcggcgaagccatcaaggaaaacggcaaggtcatc
gtgaccggctgcatgggcgtggaagaaggcaacatccgcaacgtgcacccaagcgtgctg
gccgtgaccggcccgcagcagtacgagcaggtggtcaatgccgtgcacgaagtggtgccg
cccaagcaggaccacaacccgctgatcgacctggtgccgccgcaaggtatcaagctgacc
ccgcgccactacgcgtacctgaagatttccgagggctgcaaccatagctgcagcttctgc
atcatcccctcgatgcgcggcaagctggtcagccgcccggtgggtgacgtcctcgacgaa
gcccagcgcctggtcaaatccggcgtgaaagagctgctggtcatctcccaggacaccagc
gcctacggtgtcgacgtgaagtaccgcaccggtttctggaacggcgcgccggtgaaaacc
cgcatgaccgaactgtgcgaagccctcagcagcctgggcgtgtgggtgcgcctgcactac
gtttacccgtacccgcacgtcgacgaactgatcccgttgatggccgccggcaaaatcctg
ccgtacctggacatcccgttccagcacgccagcccgaaagtgctcaaggccatgaaacgt
ccggccttcgaagacaagaccctggcgcgcatcaagaactggcgcgagatctgcccggaa
ttgatcatccgttccaccttcatcgtcggcttccctggcgaaaccgaagaggacttccag
tacctgctggactggttgactgaggcgcagctggaccgcgtcggatgcttccagtactcg
ccggtcgaaggtgccccggccaacctgctggacctggccgtggtgccggatgacgtcaag
caggaccgttgggagcgtttcatggcgcaccagcaggccatcagctcggcgcgcctgcaa
ctgcgcatcggcaaggaaatcgaagtgctgatcgacgaagtcgacgagcaaggcgcggtg
ggccgctgcttcttcgatgcgccggagatcgacggtaacgtgttcatcgacgatgccagc
ggcttgaagccaggcgacaaggtctggtgcaccgtgaccgatgccgacgaatacgatttg
tgggctgaaaagcgcgactga
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