Pelagovum pacificum: I8N54_17840
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Entry
I8N54_17840 CDS
T06971
Symbol
rsmD
Name
(GenBank) 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
ppaf
Pelagovum pacificum
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppaf03009
]
I8N54_17840 (rsmD)
Enzymes [BR:
ppaf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
I8N54_17840 (rsmD)
Ribosome biogenesis [BR:
ppaf03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
I8N54_17840 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
MTS
Methyltransf_25
UPF0020
MethyltransfD12
Methyltransf_31
Motif
Other DBs
NCBI-ProteinID:
QQA42616
LinkDB
All DBs
Position
3627552..3628106
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AA seq
184 aa
AA seq
DB search
MRIIGGQHRGLRLAEVGKGDAGAHLRPTPDRVRESLFNILASHGLPDGVRVLDLFAGTGA
LGLEALSRGAVHCTFVDSGRVAQRLLRENLGKARREGDATLLTCDVTRLPAGEGCGLVFL
DPPYGKGLAPKALARAVDGGWLAPDAVVVCEDSTPIDPPEGFDLLDRRKYGDTHLTLICF
ARET
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
gtgaggatcatcggcggtcagcaccggggcctccgcctcgccgaggttgggaaaggcgac
gccggggcgcacctgcgtccgacgcccgaccgggtgcgggagagcctgttcaacatcctc
gccagccacggcctgcccgacggggtgcgggtgctggacctgttcgccgggactggtgcg
ctcgggctggaggccctgtcgcggggcgctgtgcattgcaccttcgtcgacagcggtcgg
gtggcgcagcggctcctgcgggagaacctcggcaaggcccggcgcgagggcgacgcgacg
ctgctgacctgcgacgtcacgcggctgcccgcgggtgagggttgcgggctggtgttcctc
gatccgccttacggcaaggggctcgcgcccaaggcgctggcgcgagcggtcgacggtggc
tggctggccccggacgcagtggtggtctgcgaggacagtacacccatcgacccgccggag
ggtttcgacctgctggaccggagaaagtatggcgacacgcacctgaccctcatttgtttc
gcgcgcgaaacataa
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