Polynucleobacter paludilacus: AOC06_08005
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Entry
AOC06_08005 CDS
T08333
Symbol
rsmD
Name
(GenBank) 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
ppal
Polynucleobacter paludilacus
Brite
KEGG Orthology (KO) [BR:
ppal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppal03009
]
AOC06_08005 (rsmD)
Enzymes [BR:
ppal01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
AOC06_08005 (rsmD)
Ribosome biogenesis [BR:
ppal03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
AOC06_08005 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
MTS
Methyltransf_31
RsmJ
Methyltransf_25
N6-adenineMlase
Met_10
Methyltransf_24
SAM_MT
Motif
Other DBs
NCBI-ProteinID:
QWD86877
LinkDB
All DBs
Position
complement(1531955..1532572)
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AA seq
205 aa
AA seq
DB search
MSKSVSKQSVELPKRIRIIGGVWRSRLLEVIDLPDLRPTTDRIRETLFNWLGQDLSGLRC
LDVFAGTGVLGFEAASRGAASVQLLEKNKKAYLALTSNLAALQSSPVAGVVQINQQDGLE
FLKRQADQSFDLIFIDPPFQDEGLLNQALNESSRVCSSSSGGCIYVEFPASRSLEEIQNL
LPAWDCGKYLEAGQVKACLFIGRSD
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaagtgtatctaagcagtcagttgaattgccgaagagaattcgtattattggt
ggagtttggcggagtcgcttacttgaggtgattgatttgccagatctcagacccaccacc
gatcgtattcgggagactctctttaattggctggggcaagatctttctggcttacgttgt
ctggatgtcttcgcaggtaccggtgttttaggatttgaggccgcttctcgcggagcagca
agcgtgcagttgttggagaaaaataaaaaagcgtatttagctttgacaagcaaccttgct
gccctccaatcttcacctgtagctggagtagttcagattaaccagcaagatggtctagag
tttttaaaacgtcaagccgatcaatcctttgatctgatctttattgacccaccctttcaa
gatgagggcctattaaatcaggccctaaacgagtcctcccgggtctgttcctcaagctct
ggaggctgtatttatgttgaatttccagcaagtcgatcccttgaggaaatccaaaaccta
ctaccggcttgggattgtggaaagtacttagaggctggacaggtaaaagcctgtctattt
attggcagaagcgactaa
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