Pteronotus mesoamericanus (Parnell's mustached bat): 129071518
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Entry
129071518 CDS
T09558
Symbol
BRIP1
Name
(RefSeq) LOW QUALITY PROTEIN: Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03440
Homologous recombination
ppam03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129071518 (BRIP1)
03460 Fanconi anemia pathway
129071518 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppam03400
]
129071518 (BRIP1)
Enzymes [BR:
ppam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
129071518 (BRIP1)
DNA repair and recombination proteins [BR:
ppam03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
129071518 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
129071518 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
129071518
NCBI-ProteinID:
XP_054430790
LinkDB
All DBs
Position
Unknown
AA seq
1247 aa
AA seq
DB search
MSSTRSEYTIGGVKINFPCKAYPSQLAMMNAIVRGLNSKQHCLLESPTGSGKSLALLCSA
LAWQQSLSGKPMDENLSKKAEVPLSCCCTCHSKDFTNDDMSQGTSHHFNSPSIPPSQRNG
TSSPWQGSPEKTTLAAKLSAKKQASICRDENDDFQREKKRIRSLETTQQIRKRHCFEKEV
HHLDTKVASGKTTKLSSPLRKINSFSTQNQSGNCSRCCCSSKQGNSQDSSNASKKDHGGK
SKVPKIYFGTRTHKQIAQITRELRRTAYSGVPMTVLSSRDHTCVHPEVVGNFNRNEKCME
LLDGKNGKSCYFYHGVHKISGQQTFQTLQGMGKAWDIEELISLGKKLKACPYYTARELVE
DADIIFCPYNYLLDSQIRESMDINLKEQVVILDEAHNIEDCARESASYSITEVQLRFARD
ELDSMVNNNIRKKDHEPLQAVCYSLINWLEANSEQLVERDYESSCKIWSGSEMLLNLHKM
GITTDTFPILQGHFSAVLQKEEKVLSIHGKEEAREVPIISASTQIMLKGLFMVLDYLFRQ
NSRFADDYKVAIQQTYSWINQTDTLDKNGFFAVPKNKKRSRQKVAVHVLNFWCLNPAVAF
SDINGKVWTIILTSGTLSPMKSFSSELGVTFTIQLEANHIINSSQVWVGTIGSGPRGRSL
CATFQHTETFEFQDEVGALVLSVCQTMSQGILCFLPSYKLLERLKERWLSTGLWQNLELV
KTVIVEPQGGEKNDFDELLQVYYDAIKYKREKDGALLVAVCRGKVSEGLDFSDDNARAVI
TIGIPFPNVKDLQVELKRQYNDQHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHKNDWG
ALILVDDRFRSNPTRYISGLSKWVRQQIQHHSTFESALESLAEFSKKHQKVIPKAPKVSK
ENRKSIQDSQSTLEVPCLKDSNSTYLLETASHLSPENPKEGKTKLCVQKPXCPEIIIQSS
SLPGDITSRKDQNDPVLLEESGEAMQEENIVFSRSSSPTFNKQTNRVSWSSFNSSRQCIT
GKILTAAPKLMSSEDSHSSTFKTEKGCETGLPLTDKSESSSLGVNPSFEPCPQSETVIPS
IKIDAALLKNDHSKQLLCCEEALDPDVELSLVSEEDKLSTSNRDFETEAEDESIYFTPEL
YDSVDTNEEKNEPAETGRNNSNCILAEDLFKIRPMKEVDSAGEMKAEDCTDTKLNRVLHI
KESKVDDIGSNIETHNNQLELEETHEIEINNFKQSPSKNKGVFPGVR
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaacacggtctgaatatacaattggtggggtgaagattaactttccttgtaaa
gcgtatccatcacagcttgctatgatgaatgctattgtcagaggattaaacagtaagcaa
cattgtttgttggaaagccctacaggaagtgggaaaagcttagctttactttgttctgct
ttagcatggcaacaatctcttagtggaaagccaatggatgaaaacttaagtaaaaaagct
gaagtaccattgtcatgttgttgtacatgccattcaaaggattttacaaatgatgacatg
agccaaggaacttcacatcatttcaatagtcccagtatacccccttctcaaagaaatggc
acttcatcaccttggcaaggctctcctgaaaaaactacgctggctgcaaagttatctgcc
aaaaaacaagcatccatatgcagagatgaaaatgatgattttcaaagagagaagaaaaga
attcgatccttagaaactacacagcagattagaaaacgtcattgttttgaaaaggaagta
caccatttggatacaaaagttgcttcaggaaagaccacaaaactcagctccccattaaga
aagataaactccttttctacacagaatcaatctggtaactgttctaggtgctgttgttct
agcaaacaaggaaacagtcaagattcttcaaatgccagtaagaaggatcatggggggaaa
tccaaggtaccaaaaatatattttgggacacgtacacacaagcagattgctcagattact
agagagctccggaggacagcgtactcaggggtcccaatgactgttctttccagcagagat
catacttgtgtccatcctgaagtagtaggtaacttcaacagaaatgaaaaatgcatggaa
ttgctggatgggaaaaatggaaaatcctgctatttttatcatggtgttcataaaattagt
ggtcagcagacattccagactctccaagggatgggcaaagcctgggatatagaagaactc
atcagcttgggcaaaaaactaaaggcatgtccatattacacagcacgagaacttgtagaa
gatgctgatataatattttgtccctacaactatcttctggattcacaaataagggaaagt
atggatatcaatctgaaagaacaggttgtcattttagatgaagctcataacatcgaggac
tgtgctcgggaatcagcaagctacagtataacggaagttcagcttcggtttgctcgagat
gaactagatagtatggtcaacaataacataaggaagaaagaccatgaacccttacaagct
gtgtgctacagcctcattaattggttagaagcaaactctgaacagcttgtggagcgggat
tatgaatcatcctgtaaaatatggagtggaagtgaaatgctcttaaatttacacaaaatg
ggtatcaccactgatacttttcccattttgcagggacatttttctgctgtccttcaaaaa
gaagaaaaagtcttatcaattcatggaaaagaggaggcaagagaagtgcctattattagt
gcttcaactcaaataatgctcaaaggactgtttatggtacttgactatcttttcaggcaa
aatagcaggtttgcagatgattataaagttgctattcaacagacttattcttggataaat
cagactgatactttagataaaaatgggttctttgctgtaccaaaaaataagaaacgttca
cgacagaaagttgcagttcatgtgctaaacttttggtgcttaaatccagctgtggccttt
tcggatattaatggcaaagtgtggacgattattttgacatctggaacattatcaccaatg
aaatccttttcatcagaacttggtgttacatttactatccaattggaagctaatcatatc
attaatagctcacaggtttgggtcggcaccattgggtcaggccccaggggtcggagtctc
tgtgctaccttccagcacacagaaacatttgagttccaggatgaagtgggggcacttgtg
ttatccgtgtgccagaccatgagccaaggaattttgtgtttcttgccatcttacaagtta
ctagaaaggttaaaagaacgttggctctccactggtttatggcaaaatctggagttggtg
aagacagtcatcgtagaaccacagggaggagaaaaaaatgatttcgatgaattactgcag
gtgtattatgatgcaatcaagtacaaacgagagaaagatggagccctcctggtagcagtt
tgccgtgggaaagtgagtgagggtctggatttctcagacgacaatgcccgtgctgtcata
acaataggaattccttttccaaatgtgaaagatcttcaggttgaactaaagcgccagtat
aatgaccagcactcaaaattgagaggtcttttacctggtcgtcaatggtatgaaatccaa
gcatacagggccttaaaccaggcccttggtagatgtattcgacataaaaatgattgggga
gctcttattctagtggatgaccgcttcaggagtaacccaactcgatatatatctggactt
tctaaatgggtgcggcagcaaattcagcaccactcaacctttgaaagtgcactggagtcc
ttggctgaattttccaaaaagcaccaaaaggtcattccaaaagcaccgaaggtatccaaa
gagaacagaaagtctatacaggacagtcagtctacacttgaagtgccttgtttgaaggac
agtaactcaacttatttattagaaacagcaagtcatctatcaccagagaatcctaaggaa
ggtaaaacaaaactgtgtgtccaaaaaccgtgatgtcctgaaatcataattcaaagttct
tctctaccaggtgacatcacctccagaaaggatcaaaatgatccagtattattggaggag
tctggcgaggcaatgcaagaagaaaacattgtgttttccagatcttcaagcccaaccttc
aacaaacaaacaaacagagttagctggtctagttttaattcttcaagacagtgtattact
ggtaaaattctgactgcagcacctaagttgatgtcatcagaagactctcattcttccact
ttcaaaacagaaaagggttgtgaaactggtttgccactcactgataaatctgagtcctca
tctctaggagtaaacccctcatttgaaccatgtcctcagtcagaaactgttattccatca
ataaagattgatgctgctcttcttaaaaatgatcattccaaacagctactctgctgtgaa
gaagccctggatccagatgttgagttgtctctagtaagtgaagaagacaaactttctact
tcaaatagagattttgaaacagaagcagaagatgaatctatctattttacacctgaactt
tatgactctgtagatacaaatgaggaaaaaaatgaaccagctgaaactggtagaaataat
tcaaattgtattttagctgaagatctttttaaaattagacctatgaaagaagtagattca
gctggggaaatgaaagctgaggattgcacggacacaaagttaaatagagtcctgcatatt
aaagaaagtaaagttgatgacattggtagcaatatagaaactcataacaaccaactggaa
ctggaggaaactcatgaaattgagataaacaactttaaacagtctccttccaaaaataaa
ggtgtgttccctggtgttaggtaa
DBGET
integrated database retrieval system
