Pseudomonas phytophila: K3169_08230
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Entry
K3169_08230 CDS
T09747
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ppao
Pseudomonas phytophila
Brite
KEGG Orthology (KO) [BR:
ppao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppao03009
]
K3169_08230 (rimO)
Enzymes [BR:
ppao01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
K3169_08230 (rimO)
Ribosome biogenesis [BR:
ppao03009
]
Prokaryotic type
ribosomal protein modification factors
K3169_08230 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
CSD2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UXZ97858
LinkDB
All DBs
Position
complement(1855313..1856656)
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AA seq
447 aa
AA seq
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MSTVTTPSAPKVGFVSLGCPKALVDSERILTQLRMEGYEVVPTYQDADVVVVNTCGFIDA
AKAESLEVIGDAIKENGKVIVTGCMGVDESVIRDVHPSVLSVTGPQQYEQVVNAVHDAAP
PNLNHNPLIDLVPPQGVKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDE
AQRLVKSGVKELLVISQDTSAYGVDIKYRTGFWNGAPVKTRMTELCQALSTMGVWVRLHY
VYPYPHVDELIPLMAAGKILPYLDIPFQHASPKVLKLMKRPAFEDKTLARIKNWREQCPD
LIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANLLDAAIVPDDVK
QDRWDRFMAHQQAISAARLQMKIGREIEVLIDEVDEQGAVGRCFFDAPEIDGNVFIALDE
NSTLKPGDKVMCRVTDADEYDLWAETL
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgtcaccacgccatccgctcccaaggtcgggttcgtcagtctgggttgccca
aaagctttggttgactccgagcgcatcctcacccaactgcgcatggaaggctacgaagtc
gtgccgacttatcaggacgccgatgttgttgtggtcaacacctgcggcttcatcgacgcg
gccaaggctgaatcgctggaagtgattggcgacgccatcaaagaaaacggcaaggtcatc
gtcaccggttgcatgggtgttgatgaaagcgtgatccgtgacgtgcatccaagcgtactg
tccgtaaccggcccgcagcagtatgagcaagtggtcaacgcagtgcatgatgccgcgcca
cccaacctcaatcacaacccgctgatcgatctggtgccgccacaaggcgtcaagctgacc
ccgcgccattacgcatacctgaaaatttccgaaggctgcaatcacagttgcagcttctgc
attatcccgtcgatgcgcggcaagctggtcagccgcccggtgggcgatgtgctcgacgaa
gcacagcgtctggtcaaatccggcgtgaaagaactgctggtgatctctcaggacaccagt
gcctacggtgtcgacatcaagtaccgcaccggcttctggaatggcgctccggtcaagaca
cgcatgaccgagctgtgccaggccctcagcaccatgggcgtctgggtccgtctgcactac
gtttatccgtatccgcacgttgacgagctgattccactgatggcagccgggaaaatcctg
ccgtatctggatatccccttccagcacgccagcccgaaagtccttaagctgatgaagcgc
ccggctttcgaagacaagaccctggcccgcatcaagaactggcgcgaacagtgcccggac
ctgatcatccgctccaccttcatcgttggcttccccggcgaaaccgaagaagacttccaa
tacctgctggactggctgaccgaagcgcaactggatcgcgtcggttgcttccagtactcg
ccggttgagggcgcgccggccaacctgctggacgcggccattgtgccggacgacgtcaaa
caggatcgctgggaccgcttcatggcgcaccaacaggccatcagcgcagctcgcctgcaa
atgaaaatcggccgggaaatcgaagtgctgattgacgaagttgacgaacaaggcgccgta
ggccgctgcttcttcgacgcaccggaaattgacggcaacgtattcatcgctctggatgaa
aacagcaccctcaagccaggcgacaaagtaatgtgccgcgttaccgacgcagacgaatac
gacctttgggccgagacgctctga
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