Pectobacterium parmentieri RNS08.42.1A: A8F97_02260
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Entry
A8F97_02260 CDS
T04513
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
ppar
Pectobacterium parmentieri RNS08.42.1A
Pathway
ppar00730
Thiamine metabolism
ppar01100
Metabolic pathways
ppar01240
Biosynthesis of cofactors
ppar04122
Sulfur relay system
Module
ppar_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
A8F97_02260
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
A8F97_02260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppar03016
]
A8F97_02260
Enzymes [BR:
ppar01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
A8F97_02260
Transfer RNA biogenesis [BR:
ppar03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
A8F97_02260
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
Diphthami_syn_2
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AOR57736
UniProt:
A0A8B3FAM2
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Position
534977..536425
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AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVVRHWDHIEVRAKDESQR
GAIRDALTRIPGIHHILEVEDHAYTDVHNIFEQALVLYRERLEGKTFCVRVKRRGKHEFS
SQDVERYVGGGLNQHIETARVNLTAPQVTVHLEIEQDRLLLIKGRYEGIGGYPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVKQVAHYLWNRFGSSHRVRFI
AIDFDPVVGEILEKVDDGQMGVVLKRMMVRAASKIAERYGVQALVTGEALGQVSSQTLTN
LRLIDNASDTLILRPLISHDKEHIIKQARELGTEDFAKTMPEYCGVISKSPTVKAVKAKI
EAEEGHFDFAILDRVVSEARNIDIREIAEQTKQDVVEVETVASFAPTDVLLDIRVPDEQD
DKPLQLEQIEIKSLPFYKLGTQFGDLDQSKTYLLYCERGVMSRLQALYLREQGFSNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccggaaatcaccatcaagagccaatctgtgcggttg
cgctttatcaagattctaaccggaaacattcgcaacgtattaaaacactatgatgaaacg
ctggcggttgtccgtcactgggatcatatcgaagttcgggccaaagacgaaagccagcgt
ggagcgattcgtgatgcgctgacgagaattccgggtattcatcatattctggaagttgaa
gatcacgcctataccgacgtgcataacatctttgaacaggcgttggtgctgtatcgtgaa
cgtctggaaggcaagacgttttgtgtacgagtaaaacgccgcggtaagcatgagtttagt
tcacaggacgtggaacgctatgtcggtggcgggctgaatcagcacattgaaacggcgcga
gtcaatctcaccgctccgcaggtcactgtgcatctggaaatcgagcaggatcgtctgttg
ctgattaagggccgttatgaagggattggcggctatccgatcggtacgcaggaagatgta
ctgtcactcatttccggtggtttcgattccggtgtatccagctatatgttgatgcgccga
ggatgccgcgtgcattactgcttcttcaatcttggcggtgcagcacacgagattggtgtg
aaacaggtggcgcattatttgtggaaccggtttggtagttcacatcgggtgcgttttatt
gctattgatttcgatcccgttgttggtgaaattctggagaaggtcgacgacgggcagatg
ggcgtcgtcttgaagcgcatgatggtgcgtgcggcctccaaaatagctgagcgttatggc
gttcaggcgttggtgactggcgaagcgctagggcaggtttccagccagacgctgactaac
ctgcgtttgatcgacaatgcttccgataccctgattttacgcccgctgatctctcatgat
aaagagcacattatcaaacaggctcgcgaactggggacggaagatttcgccaaaacgatg
ccggaatattgcggtgtaatctccaaaagcccgacggtgaaggccgtgaaagcgaagatt
gaggccgaggaaggccactttgactttgctattctggatcgcgtggtgagtgaagcgcga
aatattgatatccgtgagatcgccgagcagaccaagcaagacgtggttgaagtcgaaacg
gtcgcatcatttgcgccaactgacgtgctgctggatatccgcgtgccggatgaacaggac
gataagccgcttcaactggagcagatcgaaattaaatccttaccgttctacaagctgggt
acgcagtttggcgatttggatcagagtaaaacctatttgctttactgcgagcgcggcgtg
atgagccgtttgcaggcgttatatttgcgtgagcaaggtttcagcaatgtgaaggtatac
cgtccgtaa
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