Pectobacterium parmentieri RNS08.42.1A: A8F97_12210
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Entry
A8F97_12210 CDS
T04513
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
ppar
Pectobacterium parmentieri RNS08.42.1A
Pathway
ppar00190
Oxidative phosphorylation
ppar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
A8F97_12210
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A8F97_12210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppar03019
]
A8F97_12210
Enzymes [BR:
ppar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
A8F97_12210
Messenger RNA biogenesis [BR:
ppar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
A8F97_12210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
EAL
Motif
Other DBs
NCBI-ProteinID:
AOR59663
UniProt:
A0A0H3I0W8
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All DBs
Position
2682936..2685008
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AA seq
690 aa
AA seq
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MGQDKLYIEKELSWLSFNERVLQEAADKSNPLIERMRFLGIYSSNLDEFYKVRFADLKRR
ILINEEQGLDGNLRHLLGKIQARVLKTDQLFDSLYNELLLEMARNQIFLVNERQVSPNQQ
EWLRDYFRQYLRPHITPILIFNETNLVEFLKDNYTYLAVEIIRGDAISYALLEIPSDKIP
RFVNLPAEAPRRRKTMILIDNILRYCLDDIFKGFFDYDALNAYSMKMTRDAEYDLVTEME
SSLLELMSSSLKQRLTAEPVRFVYQRDMPDAMVTMLQEKLGISSFDSVIPGGRYHNFKDF
ISFPNVGRANLVNKPLPRLRHTGFNHFRNGFDAIRERDILLYYPYHTFEHVLELLRQASF
DPSVLSIKINIYRVAKDSRIITSMIHAAHNGKKVTVVVELQARFDEEANIHWAKRLTEAG
VHVIFSVPGLKIHAKLFLISRREGENIVRYAHIGTGNFNEKTARLYTDYSLLTADERITN
EVRRVFNFIENPYRPVSFEHLLVSPQNSRDKLYQLIDTETKNALANRDAGITLKVNNLVD
KGLAEKLYQASSAGVKINLLVRGMCSLIPNLPGISENIQVISILDRYLEHDRVYVFNNGG
DKKVYLSSADWMTRNIDYRIEVAVEILDPILKNRVLETLDILFSDTVKARVIDKESSNRY
VSRGNKRKVRAQNAIYDYIKALEQPGDKPE
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaggacaaactctatatagagaaagaattaagttggttatcctttaatgagcga
gtacttcaggaagcagcggataaaagcaatccattaatcgaacgcatgcgctttctgggc
atttactccagcaaccttgatgaattttataaagtccgttttgccgacttgaaaagacgc
attctgattaacgaagaacaaggtctggacggcaatctgcggcatcttttaggcaaaatt
caggcgcgtgtactaaaaaccgatcaactctttgacagcttgtataacgaactgctgctg
gagatggcgcgtaaccaaatttttctggtcaacgaacgtcaggtttcccctaatcagcag
gagtggctgagggattactttcggcaatatctgcgcccgcacatcacgccaatactgatc
tttaacgaaaccaatttggtggagttcctgaaggataactacacctatctggccgtcgaa
atcattcgtggcgatgcgatcagttatgccctgctggaaattccttcggataaaataccg
cgtttcgtcaacctgcctgcggaagcgccgcgtcgccgtaagaccatgatccttatagat
aacattctgcgttactgtcttgatgatatcttcaagggcttctttgattatgatgcgctg
aacgcgtattccatgaagatgacgcgcgatgcggaatacgatctggtcacggaaatggaa
tccagcctgttggagttgatgtcctccagcctgaaacagcgcttaaccgccgaaccggtg
agattcgtctatcagcgtgacatgccggacgcgatggtcacgatgctacaagagaaactg
gggatttcatcctttgactccgtgatccccggcgggcgttatcataatttcaaagatttt
atttctttcccgaacgttggacgcgccaatctggtcaacaaaccgttgcctcgcctgcgg
cacacgggattcaaccattttcgcaacgggtttgatgcgatccgcgaacgtgacatcctg
ctctattatccgtaccacacctttgaacatgtgctggagttgctgaggcaggcctctttc
gatcccagcgtgttgtccatcaaaatcaatatttaccgcgtcgccaaggactcacgcatc
ataacctcgatgattcatgcggcgcacaacggcaagaaagttacggtggtcgtggaacta
caggcacgctttgacgaagaagcgaatatccactgggccaagcgtctgaccgaagctggc
gtacacgtcattttctcggtacccgggctgaagatacatgccaagctgtttcttatttcc
cgtcgtgaaggggaaaacatcgtgcgttacgcacatataggcaccggtaacttcaacgaa
aaaaccgcccgtctgtataccgactattcgctgctgaccgccgatgaacgcattaccaac
gaagtccgtcgcgtcttcaacttcattgaaaacccttaccgtccggtcagtttcgagcac
ctcctggtgtcaccacaaaactcccgcgacaaactttaccaactgatcgataccgagacc
aaaaacgcgctggctaatcgtgatgcaggcattacgcttaaggtaaataatctggtggat
aaagggctggcggaaaagctgtatcaggcttcctctgcgggcgtgaagattaacctgctg
gtacgcggcatgtgctcattgatccctaatctgccggggatcagtgaaaatattcaggtc
atcagtattcttgaccgctatctggaacacgatcgggtgtatgtcttcaacaacggtggg
gacaaaaaagtctacctctcctccgccgactggatgacccgtaatattgattatcgcatt
gaagtcgcagtggaaatccttgatcccattttgaaaaaccgcgtactggaaacactggat
attctgttcagcgacacggtgaaagcccgcgtcattgataaagagtcgagcaaccgctat
gtatcacgcggcaacaagcgtaaagtacgcgcgcaaaatgccatttacgactacatcaag
gcgttggagcaacctggagataagcctgaataa
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