Pectobacterium parvum: LOZ86_01670
Help
Entry
LOZ86_01670 CDS
T07916
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
ppav
Pectobacterium parvum
Pathway
ppav00540
Lipopolysaccharide biosynthesis
ppav01100
Metabolic pathways
ppav01250
Biosynthesis of nucleotide sugars
Module
ppav_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
LOZ86_01670 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ppav01005
]
LOZ86_01670 (rfaD)
Enzymes [BR:
ppav01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
LOZ86_01670 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
ppav01005
]
Core region
LOZ86_01670 (rfaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
ThiF
KR
Motif
Other DBs
NCBI-ProteinID:
UFK39647
LinkDB
All DBs
Position
complement(373485..374417)
Genome browser
AA seq
310 aa
AA seq
DB search
MIIVTGGAGFIGSNIVKSLNDIGYRDILVVDNLKDGTKFANLVDLDIADYVDKEDFIASI
VAGDDLGDIEAVFHEGACSSTTEWDGKYMMDNNYQYSKDVLHYCLDRNIPFLYASSAATY
GGRNDNFIEARQYEQPLNVYGYSKFLFDQYVREILPEAESQICGFRYFNVYGPREGHKGS
MASVAFHLNNQINQGENPKLFSGSENFQRDFIYVGDVAAVNLWFWQNGVSGIFNCGTGRA
ESFQAVADATLAFHQKGSVEYIEFPEKLKGRYQAYTQADLTNLRAAGYDKPFKTVAEGVA
EYMAWLNRTV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgttactggcggtgccggttttatcggcagcaatatcgtaaaatctctgaat
gacatcggctatcgggacattctggttgtcgataacctgaaagacggcaccaagttcgcc
aatctggtcgatctggacatcgcagattacgtggataaagaagatttcatcgccagcatc
gttgcaggcgacgatctgggcgatatcgaagccgtattccatgaaggcgcttgctcttcc
accaccgagtgggatggcaaatacatgatggataacaactatcagtattctaaagacgtg
ctgcactattgcctcgatcgcaacattccgttcctgtatgcctcgtctgccgcaacctac
ggcggtcgtaacgataactttatcgaagcgcgccaatacgagcagccgctgaacgtctat
ggctactccaagttcctgttcgatcagtacgtgcgtgaaattctcccagaagctgaatcg
cagatctgcggcttccgctatttcaacgtctacggaccacgcgaaggccacaaaggcagc
atggcgagtgtcgcgttccatctgaacaaccagattaaccagggtgaaaatccgaagctg
ttctccggtagcgagaacttccaacgtgactttatctacgtcggtgatgtcgccgccgtc
aacctgtggttctggcaaaacggtgtttccggcatcttcaactgcggtaccggtcgcgcc
gaatccttccaggctgttgccgatgccaccctcgccttccatcagaaaggcagcgtggaa
tacatcgaatttcctgagaaactgaaaggccgctatcaggcttatacacaagccgacctc
accaatttgcgtgccgcaggctatgacaagccgttcaaaaccgtcgccgaaggcgtggcg
gaatatatggcctggctgaaccgtaccgtttaa
DBGET
integrated database retrieval system