Pectobacterium parvum: LOZ86_14595
Help
Entry
LOZ86_14595 CDS
T07916
Name
(GenBank) AMP-binding protein
KO
K03367
D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:
6.1.1.13
]
Organism
ppav
Pectobacterium parvum
Pathway
ppav00470
D-Amino acid metabolism
ppav00552
Teichoic acid biosynthesis
ppav01100
Metabolic pathways
ppav01503
Cationic antimicrobial peptide (CAMP) resistance
ppav02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LOZ86_14595
09107 Glycan biosynthesis and metabolism
00552 Teichoic acid biosynthesis
LOZ86_14595
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LOZ86_14595
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
LOZ86_14595
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
ppav01504
]
LOZ86_14595
Enzymes [BR:
ppav01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.13 D-alanine---poly(phosphoribitol) ligase
LOZ86_14595
Antimicrobial resistance genes [BR:
ppav01504
]
Gene sets
CAMP resistance modules
Cationic antimicrobial peptide (CAMP) resistance, dltABCD operon [MD:
M00725
]
LOZ86_14595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Ldh_1_C
EKR
Motif
Other DBs
NCBI-ProteinID:
UFK38166
LinkDB
All DBs
Position
complement(3241996..3243429)
Genome browser
AA seq
477 aa
AA seq
DB search
MKRHSELQELQDFLRAALLDPANPQQLAISGSDDAMTWQQLSAAVTDWSRRYQHCQQPDG
APVVLYGHQQAEFAVAIYSCLLHNIPYIPVDCIYPQERLNEICHLASAPYYYDVATRQFI
ATGEAGQALVEQDLAYIMFTSGSTGKPKGVQIGRESLWHFMKWVRQDFSLPDVPVLMNHA
VFSFDLSLIPLLANLATGGHIVLNAKEDIVAENWLDRLKDNGVSVWVSTPSFAYQRLLSP
QFNSEYLPELNVFVFIGEVLNKALVKQLRRRFPHAKILNSYGPTEATIATTVIEITDEIL
HSENDLLPVGAMMPDSRMEITSEGELIIWGKNVMRGYLGLAKENAEKLLHRESEAFRGYR
TGDLGYEDGLLYCQGRNDSQIKLNGYRIEINEIENRLLAISDISEAVVLPLMKSGGGVLR
IAAFCVTNLAPEAIKTSLSKVIPPYMVPSQIIIKDALPLNPNGKIDRKLLDSHARTI
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtcactcagagcttcaggaactacaagatttcctccgggcggcattactcgac
cccgcgaacccacagcagttggcgattagtggcagcgatgacgcgatgacctggcaacag
ctctccgctgccgtgacagactggtcgcgtcgttatcagcactgccagcagccagatggc
gcgccggtcgtgttatatggccatcagcaggcggaattcgccgtggctatctatagctgt
ttgctgcataacatcccgtatattccggtggattgcatctatcctcaggagcggcttaac
gagatttgccacctggcgagtgcgccttactattacgatgtggcgaccagacagttcatt
gctaccggtgaagcagggcaggcgttagtcgagcaagatcttgcctatatcatgttcacc
tccggcagcactggaaagcctaaaggggtgcagatcgggcgtgaaagcctgtggcacttc
atgaagtgggtgcgccaggacttttcgctgccagacgtgccggtgctgatgaaccatgca
gtgttcagcttcgatctctctctgatcccgctgctggcgaatctggcgactggggggcat
atcgttctgaatgcaaaagaggatatcgtggcagaaaactggctcgatcgcctgaaagac
aacggtgtttccgtctgggtttcaacgccatccttcgcctaccagaggttgctgtctccc
cagttcaatagtgaatatttacctgaacttaacgtcttcgtgttcattggcgaagtgctc
aacaaagcgctggtaaaacagttacgccgccgcttcccgcatgccaaaattctcaattcc
tatggcccaacggaagcgactatcgcgaccaccgtcatcgaaatcaccgatgagatcctg
cacagtgaaaacgatctgctgccggtcggcgcgatgatgccggactccagaatggaaatt
acgtctgagggcgaactgatcatttggggaaaaaacgtgatgcgcggctaccttgggctg
gcgaaagagaatgcggagaaattgctgcatcgggagagcgaggcgttccggggctacaga
actggcgacctgggatatgaagacgggctgctgtactgtcagggtcgcaatgatagccag
atcaaactgaatggctatcgcattgaaatcaatgagattgaaaatcgtctgttggcgata
tccgacatcagcgaagcggttgttctaccgttgatgaaatcgggcggtggcgttctgcgc
atcgcggcgttctgcgtgacgaacttagcgccagaagcgattaaaacgtcgctctcgaag
gtcattccgccttacatggtgccttcccaaattattatcaaagatgcgttgccgcttaat
cctaacggcaaaattgaccgtaaactgctggacagccatgcccgcacgatctaa
DBGET
integrated database retrieval system
