Pectobacterium parvum: LOZ86_15670
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Entry
LOZ86_15670 CDS
T07916
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
ppav
Pectobacterium parvum
Pathway
ppav00730
Thiamine metabolism
ppav01100
Metabolic pathways
ppav01240
Biosynthesis of cofactors
ppav04122
Sulfur relay system
Module
ppav_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
LOZ86_15670 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
LOZ86_15670 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppav03016
]
LOZ86_15670 (thiI)
Enzymes [BR:
ppav01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
LOZ86_15670 (thiI)
Transfer RNA biogenesis [BR:
ppav03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
LOZ86_15670 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
Diphthami_syn_2
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
UFK38367
LinkDB
All DBs
Position
complement(3491067..3492515)
Genome browser
AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVVRHWDHIEVRAKDESQR
EAIRDALTRIPGIHHILEVEDHAYTDVHNIFEQALALYRERLEGKTFCVRVKRRGKHEFS
SQDVERYVGGGLNQHIETARVNLTAPQVTVHLEIEQDRLLLIKGRYEGIGGFPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVKQVAHYLWNRFGSSHRVRFI
AIDFDPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTN
LRLIDNASDTLILRPLISHDKEHIIKQARELGTEDFAKTMPEYCGVISKSPTVKAVKAKI
EAEEGHFDFAILDRVVSEARNIDIREIAEQTKQDVVEVETVASFAPTDVLLDIRAPDEQD
DKPLELDQIEIKSLPFYKLGTQFGDLDQSKTYLLYCERGVMSRLQALYLREQGFSNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccggaaatcaccatcaagagccaatctgtgcggttg
cgctttatcaagattctaaccggaaacattcgcaacgtattaaaacactatgatgaaacg
ctggcggttgtccgtcactgggatcatatcgaagttcgggccaaagacgaaagccagcgt
gaggcgattcgtgatgcgctgacaagaattccgggcattcaccatattctggaagttgaa
gatcacgcctacaccgacgtgcacaatatctttgaacaagcgctggcgctgtaccgtgag
cggttggaaggcaagacgttttgcgtgcgagtgaaacgtcgcggtaagcatgaattcagc
tcacaggacgtagaacgctacgtcggcggcggtttgaaccagcacattgaaacggcacga
gtcaatctcactgcaccgcaggtcaccgtgcatctggaaatcgagcaggaccgtttgctg
ctgattaaagggcgctatgaaggtatcggcggcttcccgatcggtacgcaggaagatgtg
ctgtcactgatttccggtggttttgactccggtgtctccagctatatgttgatgcgtcgc
ggatgtcgtgtgcattactgcttcttcaacctgggtggtgcagcccatgagattggggtg
aaacaggtcgcacactatctgtggaaccgctttggtagctcgcatcgggtgcgttttatt
gctatcgacttcgatcctgtcgtgggtgaaattctcgagaaggtcgacgatggccagatg
ggcgtcgtgctgaagcgcatgatggtgcgagcggcctccaaagttgctgagcgttacggt
gttcaggcgttggtgactggtgaagcgttagggcaggtgtccagtcagacgctaaccaac
ctgcgtttgatcgataatgcctccgataccctgattctgcgtccgctgatttctcatgat
aaagagcacattatcaaacaggctcgtgagctggggacggaagatttcgccaaaacgatg
ccggaatactgtggtgtgatctctaaaagcccgacggtgaaggcagtgaaagcgaagatt
gaggccgaagaaggccactttgattttgctatcttggatcgcgtggtgagtgaagcacgg
aatattgatatccgtgagatcgccgagcagacgaagcaagatgtggttgaagtcgaaacg
gtcgcgtcgtttgcgccaactgacgtgctgttggatatccgcgcgccggatgaacaggac
gataaaccgcttgagctggatcagatcgaaatcaaatccttaccgttctacaagctgggt
acgcagtttggcgatttggatcagagtaaaacctatctactttactgcgagcgtggcgtg
atgagccgcttgcaggcgctgtacctgcgtgagcaaggtttcagcaatgtgaaggtatac
cgtccgtaa
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