Pseudomonas putida BIRD-1: PPUBIRD1_0326
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Entry
PPUBIRD1_0326 CDS
T01975
Symbol
sda
Name
(GenBank) Sda
KO
K01752
L-serine dehydratase [EC:
4.3.1.17
]
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb00260
Glycine, serine and threonine metabolism
ppb00270
Cysteine and methionine metabolism
ppb01100
Metabolic pathways
ppb01110
Biosynthesis of secondary metabolites
ppb01200
Carbon metabolism
ppb01230
Biosynthesis of amino acids
Module
ppb_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PPUBIRD1_0326 (sda)
00270 Cysteine and methionine metabolism
PPUBIRD1_0326 (sda)
Enzymes [BR:
ppb01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.17 L-serine ammonia-lyase
PPUBIRD1_0326 (sda)
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Gene cluster
GFIT
Motif
Pfam:
SDH_alpha
SDH_beta
Serine_rich
MmgE_PrpD_N
Motif
Other DBs
NCBI-ProteinID:
ADR58027
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All DBs
Position
377089..378465
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AA seq
458 aa
AA seq
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MAISVFDLFKIGVGPSSSHTVGPMRAGALFVQGLRERGELERVKRIEVRLYGSLSATGIG
HGTDNATIMGLMGEWPDAIDPTQIVPRIADLRETNTLQLDSRLPIEFVWARDMLLLDENL
PYHPNAMTLIAEGEQGELHRDTYYSVGGGFVVDAAQAASGVLDADQTVLPYDFNSAAELL
RLCKQNDLSVSQLMMANEKVWRSEEDIRAGLYKLWEAMQECVNNGLKYEGTLPGGLNVRR
RAAKLHRSLQEIGKPNVIGSTMSAMEWVNLFALAVNEENAAGGRMVTAPTNGAAGIIPAV
LHYYMRFSDEVDESSVVDYFLAAAAVGILCKKNASISGAEVGCQGEVGSACAMAAAGLAE
VLGATPAQVENAAEIALEHNLGLTCDPVGGLVQVPCIERNAIAAVKAINAVQMALRGDGE
HFISLDQVIRTMRDTGADMHDKYKETSRGGLAVSAIEC
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggccatcagcgtgttcgacctgttcaagatcggtgtcgggccctccagctcccacacc
gtcggccccatgcgtgctggcgccctgttcgttcagggcctgcgagaacgcggtgagctg
gagcgtgtaaaacggatcgaagtgcgcctgtatggctcgctgtcggccaccggtatcggc
catggcaccgacaacgccaccatcatgggcctgatgggcgagtggcctgacgccattgac
ccgacccagatcgtgccgcgtatagccgacctgcgcgaaaccaacaccctgcagctggat
agccgcttgcccatcgagtttgtctgggcccgtgacatgctgctgctggacgagaacctg
ccgtatcaccccaacgccatgaccctgattgccgaaggcgagcagggcgagttgcaccgc
gacacctattactcggtgggcggcggctttgtggtcgatgcagcccaagccgccagcggt
gtgttggatgctgaccagacggtgttgccgtacgacttcaacagcgccgccgaactgctg
cgcctgtgcaagcaaaacgacctcagcgtgtcgcaattgatgatggccaacgagaaggtc
tggcgcagcgaggaagacatccgcgctggcctgtacaagctctgggaagccatgcaggaa
tgcgtcaacaacggcctcaagtacgagggcacgctacccggcgggctgaacgtgcgccgg
cgcgccgccaagctgcaccgcagcctgcaggaaattggcaagcccaacgtgatcggctcg
accatgagtgccatggagtgggtcaacctgttcgccttggcagtcaacgaagaaaacgcc
gccggtgggcgcatggtgaccgcgcctaccaacggcgcggcaggcatcatcccggcagtg
ctgcattactacatgcgtttcagtgatgaggttgatgagtccagcgttgtcgactacttc
ctggccgccgccgccgtgggcatcctgtgcaagaagaacgcctcgatctctggtgccgaa
gtgggttgccagggggaagtcggctcggcctgcgcgatggccgcagcaggccttgccgaa
gtactcggcgccaccccggcacaggttgagaacgccgctgaaattgccctggaacacaac
cttggcctgacctgcgacccggtgggcgggttggtgcaagtgccctgcatcgagcgcaac
gcgattgctgccgtgaaggccatcaacgcggtgcagatggcgttgcgcggcgatggtgag
cacttcatttccctcgaccaggtaatccgcaccatgcgcgataccggggccgatatgcac
gacaagtacaaagagacctcgcgcggcggcctggcggtcagcgctatcgagtgctga
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