KEGG   Pseudomonas putida BIRD-1: PPUBIRD1_0555
Entry
PPUBIRD1_0555     CDS       T01975                                 
Symbol
ribD
Name
(GenBank) RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
ppb  Pseudomonas putida BIRD-1
Pathway
ppb00740  Riboflavin metabolism
ppb01100  Metabolic pathways
ppb01110  Biosynthesis of secondary metabolites
ppb01240  Biosynthesis of cofactors
ppb02024  Quorum sensing
Module
ppb_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:ppb00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    PPUBIRD1_0555 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PPUBIRD1_0555 (ribD)
Enzymes [BR:ppb01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     PPUBIRD1_0555 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     PPUBIRD1_0555 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: ADR58247
LinkDB
Position
624927..626057
AA seq 376 aa
MPSQAAILDAHYMARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVH
ALRQAGELARGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGLRR
LAEAGIEVASGVLEAEARALNPGFLKRMEHGLPFVRAKLAMSLDGRTAMASGESQWITGP
AARSAVQRLRARSSVVLTSAASVLADNARMTVRGAELGLDAETTALALSRTPLRVLVDGR
LRLSLASPFFQAGPALVVTAVADDPRYAAAGHELLSLPGDNGQVDLGALLHALAARGVNE
ILLEAGAGLVGAFARQGLVDEYQLFVAGTFLGSQARPLLDWPMDKMSEAPRLKITEMRAV
GDDWRVTAIPLPAPGV
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgcccagccaagctgccatccttgacgcccactacatggcccgtgcgctggagctggcg
cgtaaaggcctgtacaccacccacccgaacccgcgcgtaggctgcgtgatcgtgcgcgat
ggcgaagtggttggcgaaggctggcacgtgcgcgccggcgagccccatgccgaagtgcat
gccctgcgccaggccggtgaacttgcccgcggtgcttgtgcctacgtcaccctggagcca
tgcagccaccatggccgtacgccgccgtgtgccgaagcgctggtcaaggccggcgtggcg
cgtgtagtagcagccatgcaggaccctaacccgcaagtggcggggcagggcctgcggcgc
ctggccgaagccggaatcgaagtggccagcggggtgctcgaagccgaggcccgcgccctc
aacccaggcttcctcaagcgcatggagcacggcctgccgttcgttcgcgccaagctggcc
atgagcctggacggccgcaccgccatggccagtggtgagagccagtggatcaccggcccg
gccgcccgctcagccgtgcagcgcttgcgcgcccgctccagcgtggtgctgaccagcgcc
gccagcgtgctggcagacaacgcacgcatgacagtgcgtggtgccgagctgggcctggat
gccgaaactactgccctggctcttagccgcacacccttgcgcgtgctggtcgatggccgt
ctgcgcctgtcactggcgtcgccgttcttccaggctggcccggctctggtggtgactgct
gtcgcagatgacccgcgctatgccgctgccggccacgaattgctcagcttgccgggcgac
aatggccaggtcgacctgggggcgctgctccacgccctggccgcccgcggcgtcaacgaa
atcctgttggaagccggtgccggcctggttggcgccttcgcacggcaaggtctggtcgat
gagtatcagctgttcgtcgctggcaccttcctcggctctcaggcccggccgctgctggac
tggccgatggacaagatgagcgaagcaccacggctgaaaattaccgaaatgcgcgcagtg
ggcgatgactggcgggtcacggccatccccctgccagcgcccggcgtataa

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