Pseudomonas putida BIRD-1: PPUBIRD1_3518 Help Entry PPUBIRD1_3518     CDS       T01975                                  Symbol fadB_3 Name (GenBank) FadB_3   KO K01825   3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] Organism ppb  Pseudomonas putida BIRD-1 Pathway ppb00071   Fatty acid degradation ppb00280   Valine, leucine and isoleucine degradation ppb00310   Lysine degradation ppb00362   Benzoate degradation ppb00380   Tryptophan metabolism ppb00410   beta-Alanine metabolism ppb00640   Propanoate metabolism ppb00650   Butanoate metabolism ppb00907   Pinene, camphor and geraniol degradation ppb00930   Caprolactam degradation ppb01100   Metabolic pathways ppb01110   Biosynthesis of secondary metabolites ppb01120   Microbial metabolism in diverse environments ppb01200   Carbon metabolism ppb01212   Fatty acid metabolism Module ppb_M00087   beta-Oxidation ppb_M00957   Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA Brite KEGG Orthology (KO) [BR:ppb00001]  09100 Metabolism   09101 Carbohydrate metabolism    00640 Propanoate metabolism     PPUBIRD1_3518 (fadB_3)    00650 Butanoate metabolism     PPUBIRD1_3518 (fadB_3)   09103 Lipid metabolism    00071 Fatty acid degradation     PPUBIRD1_3518 (fadB_3)   09105 Amino acid metabolism    00280 Valine, leucine and isoleucine degradation     PPUBIRD1_3518 (fadB_3)    00310 Lysine degradation     PPUBIRD1_3518 (fadB_3)    00380 Tryptophan metabolism     PPUBIRD1_3518 (fadB_3)   09106 Metabolism of other amino acids    00410 beta-Alanine metabolism     PPUBIRD1_3518 (fadB_3)   09109 Metabolism of terpenoids and polyketides    00907 Pinene, camphor and geraniol degradation     PPUBIRD1_3518 (fadB_3)   09111 Xenobiotics biodegradation and metabolism    00362 Benzoate degradation     PPUBIRD1_3518 (fadB_3)    00930 Caprolactam degradation     PPUBIRD1_3518 (fadB_3) Enzymes [BR:ppb01000]  1. Oxidoreductases   1.1  Acting on the CH-OH group of donors    1.1.1  With NAD+ or NADP+ as acceptor     1.1.1.35  3-hydroxyacyl-CoA dehydrogenase      PPUBIRD1_3518 (fadB_3)  4. Lyases   4.2  Carbon-oxygen lyases    4.2.1  Hydro-lyases     4.2.1.17  enoyl-CoA hydratase      PPUBIRD1_3518 (fadB_3)  5. Isomerases   5.1  Racemases and epimerases    5.1.2  Acting on hydroxy acids and derivatives     5.1.2.3  3-hydroxybutyryl-CoA epimerase      PPUBIRD1_3518 (fadB_3)   5.3  Intramolecular oxidoreductases    5.3.3  Transposing C=C bonds     5.3.3.8  Delta3-Delta2-enoyl-CoA isomerase      PPUBIRD1_3518 (fadB_3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  3HCDH_N ECH_1 3HCDH ECH_2 NAD_binding_2 SDH_sah Motif Other DBs NCBI-ProteinID:  ADR61111 LinkDB All DBs Position complement(3933177..3935324) Genome browser AA seq 715 aa AA seqDB search MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIRADASVKGVIVSS GKDVFIVGADITEFVDNFKLPEAELVAGNLEANRIFNAFEDLEVPTVAAINGIALGGGLE MCLAADYRVMSTSARIGLPEVKLGIYPGFGGTVRLPRLIGSDNAIEWIAAGKENRAEDAL KVGAVDAVVAPELLLAGALDLIKRAISGELDYKAKRQPKLEKLKLNAIEQMMAFETAKGF VAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTSVAESLIGLFLNDQEL KRKAKAHDEIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEAIQLGLNEASKL LGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENPKVKQAVLAEVEGQVK DDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSDVAVATTVA YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL MDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQKNGKGFYAYETDKRGKP KKVFDATVLDVLKPIVFEQREVTDEDIINWMMVPLCLETVRCLEDGIVETAAEADMGLVY GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGPLYHPTAKLREMAKNGQRFFN NT seq 2148 nt NT seq  +upstreamnt  +downstreamnt atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgagctc aagttcgacctcaagggtgagtccgtcaacaagttcaaccgccttaccctgaacgagctg cgccaggccgtcgatgccatccgggccgatgcttcggtcaagggcgtgatcgtcagcagt ggcaaggacgtgttcatcgtcggcgccgacatcaccgagttcgtcgacaacttcaagctg cctgaggccgaactggtcgctggcaacctggaagccaatcgcatcttcaacgccttcgaa gacctcgaagtgccgaccgtggctgccatcaacggcatcgcgctgggcggcggcctggaa atgtgcctggcggccgactaccgggtcatgtccaccagcgccaggatcggcctgccggaa gtcaagctgggtatctacccgggcttcggcggtaccgtgcgcctgccgcgcctgatcggc tcggacaacgccatcgagtggatcgccgccggcaaggaaaaccgtgccgaagatgccctg aaagtgggggccgtcgacgccgtggtcgcccctgagctgctgctggccggtgccctcgac ctgatcaagcgtgccatcagtggcgagctggactacaaggccaagcgccagccgaagctg gaaaagctcaagctcaatgccattgagcagatgatggccttcgagactgccaagggcttc gtcgctggccaggccggcccgaactacccggccccggtcgaagcgatcaagagtatccag aaagccgccaacttcggtcgcgacaaggccctggaagtcgaagctgcaggctttgccaag ctggccaagacctcggtcgccgagagcctgatcggcttgttcctgaacgatcaggaactc aagcgcaaggccaaggcgcatgacgagatcgcccacgacgtgaagcaggccgccgtgctc ggcgccggcatcatgggcggcggtatcgcctaccagtcggcggtcaaaggtacgccgatc ctgatgaaagacatccgcgaggaagccattcagctgggtctgaacgaggcctccaagctg ctcggcaaccgcgtcgagaagggccgcctgaccccggccaagatggccgaggccctcaac gccattcgcccgacgctgtcctatggcgatttcgccaatgtcgacatcgtcgtcgaggct gtggtcgagaacccgaaggtcaagcaagcggtactggcggaagtggaaggccaggtgaag gacgatgcgatcctcgcttccaacacctctaccatctcgatcaatctgctggccaaggcg ctcaagcgcccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg ctggttgaagtgatccgtggcgagaagtccagtgacgtggcggtcgccaccaccgtggcc tacgccaagaagatgggcaagaacccgatcgtggtcaacgactgcccgggctttttggtc aaccgcgtgctgttcccgtacttcggtggttttgccaagctggtcagcgccggtgtcgac ttcgtgcgcatcgacaaggtcatggaaaagtttggctggccgatgggcccggcctacctg atggacgtggtcggcatcgacaccggtcaccatggccgtgacgtcatggccgaaggcttc ccggatcgcatgaaggacgagcgccgctcggcggtcgacgcgttgtacgaggccaaccgc ctgggccagaagaacggtaagggcttctacgcctacgaaaccgacaagcgcggcaaaccg aagaaggtcttcgatgccaccgtgctcgacgtgctcaaaccgatcgtgttcgagcagcgt gaagtcactgacgaagacatcatcaactggatgatggtcccgctgtgcctggagaccgtg cgttgcctggaagacggcattgtcgaaaccgccgccgaagctgacatgggcctggtctac ggcattggtttccctcccttccgcggtggtgcgctgcgttacatcgactcgatcggtgtg gccgaattcgtcgccctggccgatcagtatgccgacctggggccgctgtaccacccgacc gccaagctgcgtgaaatggccaagaacggccagcgcttcttcaactga

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