Pseudomonas putida BIRD-1: PPUBIRD1_4834
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Entry
PPUBIRD1_4834 CDS
T01975
Symbol
thiI
Name
(GenBank) ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb00730
Thiamine metabolism
ppb01100
Metabolic pathways
ppb01240
Biosynthesis of cofactors
ppb04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
PPUBIRD1_4834 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
PPUBIRD1_4834 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppb03016
]
PPUBIRD1_4834 (thiI)
Enzymes [BR:
ppb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
PPUBIRD1_4834 (thiI)
Transfer RNA biogenesis [BR:
ppb03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
PPUBIRD1_4834 (thiI)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
ADR62387
LinkDB
All DBs
Position
complement(5399913..5401367)
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AA seq
484 aa
AA seq
DB search
MKLIVKVFPEITIKSRPVRKRFIRQLGKNIRNVLKDLDPELAVDGVWDNLEVVTRVEDEK
VQREMIERLTCTPGITHFLQVEEYPLGDFDDIVAKCKHHFGHLLAGKHFAVRCKRGGHHD
FTSMDVDRYVGSQLRQQCGAAGIELKKPEVLVRIEIRDQRLYVIHNQHNGIGGYPLGALE
QTLVLMSGGFDSTVAAYQMMRRGLMTHFCFFNLGGRAHELGVMEVAHYLWKKYGSSQRVL
FISVPFEEVVGEILNKVDNSYMGVTLKRMMLRGAAHMADRLQIDALVTGEAISQVSSQTL
PNLSIIDSATDKLVLRPLLASHKQDIIDQATEIGTADFAKHMPEYCGVISVNPTTHAKRH
RMEHEEKQFDMAVLERALERAKFISIDHVIDELGKDIEIEEVAEALPGQIVIDIRHPDAQ
EDEPLVLEGIEVQTMPFYAINSKFKHLDPTRQYLLYCDKGVMSRLHAHHLLSEGHANVRV
YRPT
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttatcgtcaaagtcttcccagaaatcaccatcaaaagccggccggtgcgcaag
cgcttcatccgccagcttggcaagaacatccgcaacgtgctcaaggatctcgaccctgag
ctcgcggtcgatggtgtctgggacaatctcgaggtggtcacccgcgtcgaagacgaaaaa
gtccagcgcgagatgatcgaacgcctcacctgcaccccgggtatcacccacttcctgcag
gtagaggaatacccgctgggtgacttcgacgacatcgtcgccaagtgcaagcaccacttc
ggccacctgctggccggcaagcacttcgccgtgcgctgcaagcgcggtggccaccatgac
ttcacctcgatggacgtcgaccgttacgtcggcagccagctgcgccagcagtgtggcgcc
gccgggatcgagctgaaaaagcctgaagtgctggtgcgcatcgaaatccgcgaccagcgc
ctgtacgtgatccacaaccagcacaatggcatcggcggttatccgctgggtgccctggag
cagaccctggtgctgatgtcgggtggtttcgactccaccgttgcggcgtaccagatgatg
cgccgcggcctgatgacccacttctgcttcttcaacctcggcggccgtgcccacgagctg
ggcgtgatggaagtggcccactacctgtggaaaaagtacggcagcagccagcgcgtcctg
ttcatcagcgtgccgttcgaagaagtggttggcgagatcctcaacaaggtcgacaacagc
tacatgggcgtgaccctcaagcgcatgatgctgcgcggcgccgcccatatggccgaccgc
ctgcagatcgacgcgctggtgaccggcgaagcgatttcccaggtgtccagccagaccctg
ccgaacctgtcgatcatcgactcggccaccgacaagctggtgctgcgcccgctgctggcc
agccacaagcaggacatcatcgaccaggccaccgaaatcggcaccgcggactttgccaaa
cacatgccggagtactgcggcgtgatctcggtaaacccgaccacccatgccaagcgtcac
cgcatggagcacgaagaaaagcagttcgacatggccgtgctggagcgcgctcttgagcgc
gccaagttcatttccatcgaccatgtgatcgatgagctgggcaaggacatcgaaatcgag
gaagtggccgaggcgctgccaggccagatcgtcatcgacattcgccaccccgatgcccag
gaagacgaacctctggtgctggaaggtatcgaagtccagaccatgccgttctacgccatc
aacagcaagttcaagcacctggaccccacgcgccagtacttgctgtattgcgacaagggt
gtgatgagccgtttgcacgcacaccatctgctcagtgagggacatgccaatgtgcgtgtt
tatcgtccgacataa
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