Pseudopropionibacterium propionicum: HMPREF9154_1367
Help
Entry
HMPREF9154_1367 CDS
T02180
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ppc
Pseudopropionibacterium propionicum
Brite
KEGG Orthology (KO) [BR:
ppc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppc03009
]
HMPREF9154_1367 (rimO)
Enzymes [BR:
ppc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HMPREF9154_1367 (rimO)
Ribosome biogenesis [BR:
ppc03009
]
Prokaryotic type
ribosomal protein modification factors
HMPREF9154_1367 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AFN45996
LinkDB
All DBs
Position
1493811..1495241
Genome browser
AA seq
476 aa
AA seq
DB search
MSDTGKIMNKVHIQTLGCARNDVDSEELAGRLAAGGFVLVDDPAEAETVVVNTCGFIEQA
KKDSIDTLLAAADFKESGTTKAVVAVGCMAERYGAQLAEVLPEADAVLGFDDYADIADRL
RSILAGGGHEAHVPRDRRKLLPIAPTDRQRAAGRIVTPGHAPLPEGLAPATGPRVIRRRL
GSGPAAPLKIASGCDRRCAFCAIPAFRGSYLSRPVADIIAEARWLVEQGVKEVLLVSENT
SSYGKDLPGVNLETLLPQLSRVDGLEWIRVSYLQPAEIRPGMLEVMLDTGKVVPYFDLSF
QHAAPGVLRRMRRFGDPDSFLGLVERIRAVEPRAGIRSNVIAGFPGETESDVETLREFII
DANLDFLGVFGYSDEEGTEGEGLDAHLDQAEVDARRELLADVANMVCESRAAERVGERTV
VLVEETGAGGASGRAPHQGPETDGVVELPGADARIGQFIEVELIDVTGIDMVGEAR
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgatactgggaagatcatgaacaaggtccacatccagacgctgggctgcgcccgc
aacgacgtcgactcggaagaactcgcgggccggctggctgcggggggattcgtgctggtg
gatgacccggctgaggcggagaccgtggtggtcaacacctgcggcttcatcgaacaggcc
aagaaggactccatcgacaccctgctggccgccgccgacttcaaggaatccggcacgacg
aaggcggtcgtggcggtggggtgcatggcggaacgctacggggcgcaactcgcggaggtc
ctgcccgaggccgatgcggttctcgggttcgacgactacgcggacattgctgatcgtctc
cggtcgatcctcgccggaggcggccacgaggcccacgttccgagggaccggcgcaaactg
ctgccgatcgcgccgacggaccgccagcgggctgccgggcggatcgtgaccccggggcac
gcccccctgccggaagggctggccccggcaacggggccgcgcgtgatccgtcgccgtttg
ggatcgggacccgcagcacccttgaagatagcctccggatgtgaccggcgctgcgccttc
tgtgccattcccgccttcaggggttcctacctctcgcgccccgtcgccgacatcatcgcc
gaggcgcgctggctcgtggagcagggagtgaaggaggtgctgctggtttccgagaacacc
tccagttacggcaaggatctccccggcgtgaacctggagaccttgctgccccagttgtcc
cgggtggacggactggaatggatccgggtctcctatctgcaacccgccgagatccggccc
ggaatgctggaggtcatgttggacaccggcaaggtggtgccctatttcgacctttccttc
cagcacgccgcgcccggggtgctgcggaggatgaggcgtttcggtgacccggattccttc
ctcgggctggtcgaacggatcagggcggtcgagccaagggcagggatccgcagcaacgtg
atcgccgggttcccgggggagaccgagtcggacgtcgagacgctccgcgagttcatcatc
gacgccaacctggattttctcggggtattcggctattccgacgaggagggcacggaggga
gagggcctggatgcccacctggaccaggcggaagtggatgcgcggcgggaactgctggcc
gacgtcgccaacatggtgtgtgagtcccgcgcagcggagagggtgggggagcggaccgtg
gtcctggtcgaggaaaccggcgctggcggggcctcggggcgcgcgccgcatcagggcccc
gagaccgacggggttgtggagcttcccggggccgatgcccggatcgggcagttcattgaa
gttgagctcatcgacgtcacaggaatcgacatggtgggagaagcccgatga
DBGET
integrated database retrieval system
