Pseudomonas pergaminensis: KUA23_07870
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Entry
KUA23_07870 CDS
T08563
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
ppeg
Pseudomonas pergaminensis
Pathway
ppeg00071
Fatty acid degradation
ppeg00280
Valine, leucine and isoleucine degradation
ppeg00310
Lysine degradation
ppeg00362
Benzoate degradation
ppeg00380
Tryptophan metabolism
ppeg00410
beta-Alanine metabolism
ppeg00640
Propanoate metabolism
ppeg00650
Butanoate metabolism
ppeg00907
Pinene, camphor and geraniol degradation
ppeg00930
Caprolactam degradation
ppeg01100
Metabolic pathways
ppeg01110
Biosynthesis of secondary metabolites
ppeg01120
Microbial metabolism in diverse environments
ppeg01200
Carbon metabolism
ppeg01212
Fatty acid metabolism
Module
ppeg_M00087
beta-Oxidation
ppeg_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ppeg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
KUA23_07870 (fadB)
00650 Butanoate metabolism
KUA23_07870 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
KUA23_07870 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
KUA23_07870 (fadB)
00310 Lysine degradation
KUA23_07870 (fadB)
00380 Tryptophan metabolism
KUA23_07870 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
KUA23_07870 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
KUA23_07870 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
KUA23_07870 (fadB)
00930 Caprolactam degradation
KUA23_07870 (fadB)
Enzymes [BR:
ppeg01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
KUA23_07870 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
KUA23_07870 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
KUA23_07870 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
KUA23_07870 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
USW02627
LinkDB
All DBs
Position
1741590..1743737
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADFRVMSATAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENKAEDAL
KVGAVDAVVAPDKLAEAALNLIKGAISGEFDYKAKRQPKLEKLKLNAIEQMMSFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIARDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEAQVK
DDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAIATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQKNGKGFYAYEADKKGKQ
KKVADPSVHEVLAPVIYEQREVSDEDIINWMMIALCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADKYADLGPLYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaactg
aagttcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaatgaattg
cgtcaggccgtagacaccatcaaagcagatgcttcggtcaagggcgtgatcgtttccagc
ggcaaggacgtgtttatcgtcggcgctgacatcaccgaattcgtcgacaacttcaagctg
cccgatgccgagctggtggctggcaacctcgaagccaacaagattttcagcgatttcgaa
gacctcaatgttcccaccgtggctgccatcaatggcatcgcgctgggcggcggcctggaa
atgtgcctggctgcagacttccgcgtcatgtcggccacagccaagatcggcctgcccgaa
gtcaagctgggcatctacccaggcttcggcggcaccgtgcgcttgccgcgcctgatcggt
gccgacaacgccatcgagtggattgccgctggcaaggaaaacaaagctgaagacgccctc
aaagtcggagccgtcgacgctgtggttgccccggacaaactggccgaagccgcactgaac
ctgatcaagggcgccatcagcggcgaatttgactacaaggccaagcgtcagccgaagctg
gaaaaactcaagctcaacgccatcgaacaaatgatgtcgttcgaaaccgccaagggtttc
gtggctggccaggccggcccgaactacccggcgccggttgaagcgatcaagaccatccag
aaagccgcgaacttcggtcgcgacaaagccctggaagtagaagctgctggcttcgtcaaa
ctggcgaaaacctcggcggcccaaagcctgatcggcctgttcctgaacgatcaggagctg
aagaaaaaggccaaggcctacgacgagattgcccgcgacgtgaaacaggctgccgtactc
ggcgccggtatcatgggcggcggtatcgcctatcagtcggcgtccaaaggcacgccgatc
ctgatgaaggacatcaacgagcacggtatcgagcaaggcctggcagaagccgccaagctg
ctggtcggtcgtgtggacaaaggtcgcatgactgccgcgaaaatggctgaagtgcttaac
ggcattcgtcctacgctgtcctacggtgatttcggccacgtcgacctggtggtcgaagcg
gttgtcgagaacccgaaggtcaagcaagccgttctggccgaagtggaagcccaggtcaaa
gacgacaccatcctggcctccaacacctcgaccatttccatctcgctgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggtgagaagtccagcgagctggccattgccaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaatgactgcccgggcttcctggtc
aaccgcgtgctgttcccgtacttcggcggtttcgccaagctggtcagtgccggtgtggac
ttcgtgcgcatcgacaaggtcatggaaaaattcggctggccgatgggcccggcgtacctg
atggacgtggttggcatcgacaccggtcaccacggtcgtgacgtgatggctgaaggcttt
ccggaccgcatgaaagacgaccgccgttcggcgatcgacgcgctgtacgaggccaagcgc
ctgggccagaagaacggcaagggcttctacgcctacgaggcggacaagaagggcaagcag
aagaaagtggccgacccttcggtgcacgaagtactggcgccggtcatctacgaacagcgt
gaggtgtcggacgaggacatcatcaactggatgatgatcgccctgtgcctggaaaccgta
cgctgcctggaagacggcatcgtcgagaccgctgccgaagccgatatgggcctggtgtac
ggtattggtttccctccattccgtggtggtgcgctgcgttacatcgactcgatcggtgtg
gctgagttcgttgccctggctgacaaatacgctgatttgggcccgctgtaccacccgacc
gcgaagctgcgtgaaatggccaagaacggccagagcttcttcggttaa
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