Pseudomonas pergaminensis: KUA23_26085
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Entry
KUA23_26085 CDS
T08563
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
ppeg
Pseudomonas pergaminensis
Brite
KEGG Orthology (KO) [BR:
ppeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppeg03016
]
KUA23_26085 (trmA)
Enzymes [BR:
ppeg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
KUA23_26085 (trmA)
Transfer RNA biogenesis [BR:
ppeg03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
KUA23_26085 (trmA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
Methyltransf_4
Methyltransf_11
Methyltransf_12
Cons_hypoth95
MTS
DREV
Methyltransf_15
RrnaAD
Ubie_methyltran
Met_10
PrmA
Motif
Other DBs
NCBI-ProteinID:
USW00439
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All DBs
Position
5755860..5756939
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AA seq
359 aa
AA seq
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MTFDAARYTAQLQDKVTRLRDLLAPFDAPEPQVFDSPLQNFRLRAEFRLWREGGERHYAM
FSQDDKRTPILIEEFPIASQRINQLMPQLKAAWQASAALSHKLFQVEFLTTLAGDAMITL
CYHRPLDEHWHTAANQLAADLNVSIIGRSKGKRDVIGHDYVVEKLDVGGRTFSYRQPEGA
FTQPNGTVNQKMLNWAYEALGDRPDDLLELYCGNGNFTLPLATRVRKVLATEISKTSVNA
ALSNLDENAVDNVTLVRLSAEELTEALNEVRPFRRLHGIDLKSYEFGSVFVDPPRAGMDP
DTCELTRRFDNILYISCNPETLAANIAQLHDTHKITQCALFDQFPWTHHMESGVLLTRR
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgacttttgacgccgcacgctacaccgctcaactgcaagacaaggtcacgcgcttgcgt
gacctgctggcaccgttcgacgcgccagagccacaggtcttcgactcgccgctgcagaat
ttccgcctgcgcgcggagttccgcctgtggcgcgaaggcggtgagcgccactacgcgatg
ttctcccaggacgacaagcgcacgccgatcctgatcgaagagttccccatcgccagccag
cgcatcaaccagttgatgccgcagctcaaggccgcctggcaagccagcgccgccctgagc
cataagctgttccaggtggagttcctcaccaccctggccggcgacgcgatgatcaccctg
tgctatcaccgcccgctggatgagcactggcataccgctgcaaaccagctggcagccgac
ttgaatgtcagcatcatcggccgctcaaagggcaagcgcgatgtgatcggccatgactac
gtggtggaaaaactcgacgtgggcggccgcaccttcagctaccgccaacccgaaggcgcc
ttcacccagcccaacggcacggtgaaccagaagatgctcaactgggcttatgaagccctg
ggtgatcgcccggatgatctactggagttgtattgcggcaacggcaacttcaccctgccc
ctggctacgcgtgtacgcaaagtactggctaccgaaatcagcaagacctcagtgaatgct
gccctgagcaaccttgatgaaaacgcggtggataacgtcacgctggtgcgtctctctgcc
gaagaactcaccgaagcgctgaacgaagtgcgtccgtttcgtcgcctgcacggtatcgat
ttgaagagttacgaattcggcagcgtcttcgtcgacccgccgcgcgccggcatggacccg
gacacctgcgaactgacccgccgcttcgacaacatcctgtacatctcctgcaacccggag
accttggcggcgaatattgcgcaactgcacgatacgcacaagattacccagtgtgcgctg
tttgaccagttcccgtggacccaccacatggaatccggggtgctgttgacccgtcgctaa
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