Prunus persica (peach): 18767598
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Entry
18767598 CDS
T03092
Name
(RefSeq) DNA mismatch repair protein MSH6
KO
K08737
DNA mismatch repair protein MSH6
Organism
pper
Prunus persica (peach)
Pathway
pper03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
18767598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pper03400
]
18767598
DNA repair and recombination proteins [BR:
pper03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
18767598
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
PTM_DIR17_Tudor
CCDC106
AAA_29
Motif
Other DBs
NCBI-GeneID:
18767598
NCBI-ProteinID:
XP_020409248
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Position
G8:complement(22486794..22496108)
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AA seq
1272 aa
AA seq
DB search
MSRRRSNGHSPLINQQRQITSFFSKTTSSPSPISSKSKQTQNPNPCPGPSPSHTTPSPLQ
SKPKPKKSHGQEVVGKRIRVYWPLDNIWYEGYVKLFSKDNGKHLVQYDDAEEELLDLGEE
KIEWVQETVKTLKRLRRGPLSTSNEVVVDGHVVMEDEDKEGSNDVADDDSSDEDWGKSGD
KDLVAEEEEELMELEDEEDDEVPTTSTNKGKRGLRSKRKLKGGGNLGSAKKTKCDKDVME
PTPNVESMKVANGMNTVVSGDASARFIVREAEKLHFLGEVRRDAKKRFPGDANYDPRTLY
LPPDFLKSLSGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHIGAKELGLQYMKGEQP
HCGFPEKNFSMNVEKLARKGYRVLVIEQTETPEQMELRRKEDGSKDKVVKREICAVVTKG
TLTEGEMLSANPDASYLMAVTENSQNVANQNTERIFGVCVVDVATSRVILGQFGDDLECS
ALSCLLSELRPVEIIKPVKLLGPETEKVLLRHTRSPLVNELVPLLEFWDAERTAQEIRRI
YRCTVDQLVSGSPKTSNLHSDDSHLEEDDLGCLPDVLSELMRTGENGICALSALGGVLFY
LKQAFLDETLLRFAKFELLPSSGFGDIVSKPYMVLDSAALENLEIFENSRNGDSSGTIYA
QLNHCVTGFGKRLLKTWLARPLYHVELIKERQDAVASLQGVNLPYALEFRKAMTRLPDME
RLLARVFSSSKACGRNANKVVLYEDAAKKQLQEFISALHGCELMVQICCSLGVILEHVES
RQLHHLLTPGQGLPDVNSILKHFKDAFDWVQANSSGRIIPHEGVDIEYDSSCEKVKEIES
HLTKYLQEQRRLLGNKSITYATVGKDSYLLEVPESLRGSIPRDYELCSSKKGIFRYWTPN
IKKSLTELSEAETGKESSLKSILHRLIGQFCEHHLKWRQLVSVTAELDVLISLAIASDYF
EGPSCRPVIMSSSCTNEVPHFSAKSLGHPVLKSDSLGKGTFVSNDITIGGSGHASFILLT
GPNMGGKSTLLRQVCLAAILAQLGADVPAESFELSPVDRIFVRMGARDHIMVGQSTFLTE
LSETATMLSYSTRNSLVALDELGRGTSTSDGQAIAESVLEHFVYKVQCRGMFSTHYHRLA
VDYQNNPEVSLCHMACQVGNGDGGVEEVTFLYRLTPGACPKSYGVNIARLAGLPISVLQK
AAAKSREFEATYGKHRKADSFFFQSPVDNMVSCIQGLISAVEKWTSHESAKSIDIDSLTE
VWHRARILEQQS
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgtcgtcggagcaacggccattctccattgatcaaccaacagcgccaaatcact
tcattcttctccaaaaccacttcttccccatcccccatttcttccaaatccaaacaaact
caaaaccctaacccttgccccggtcccagccctagccacaccactccttcgcctctccag
tccaagcccaagcccaagaaatcccatggccaagaggttgtcggcaagaggatcagggtt
tactggccgttggataatatctggtacgaaggttatgtgaagttgttcagtaaggataat
ggtaaacatttagttcagtacgatgatgctgaagaagagttgttggatttgggagaggag
aagatcgaatgggtccaggaaaccgtcaagaccttgaaacgtttgaggcgaggccctttg
tcgacttccaacgaggtcgttgtggatgggcatgtggttatggaggatgaggataaggaa
ggcagcaatgatgttgctgacgatgattccagcgacgaggactgggggaagagtggggac
aaagacctagttgctgaggaggaagaggagcttatggaattggaggatgaggaagatgat
gaagtgcccacaacaagcacgaacaaaggaaagcgaggcttgaggagtaaacgaaagctg
aaaggtggagggaatttggggtctgctaagaagaccaagtgtgataaagatgtgatggag
cctacccctaatgttgagagcatgaaggtggctaatggtatgaatactgttgtatctggt
gatgcctcagcaaggtttatcgttcgtgaagctgagaagttgcacttcctgggggaagtg
cgtagggatgccaaaaaaagatttcctggagatgcaaattatgatccaagaactctttac
ttacctcctgatttcttaaagagtttatcaggtggccagagacaatggtgggagtttaag
tcaaagcacatggacaaagttctctttttcaagatgggcaaattttatgaactttttgaa
atggatgcacacataggagcaaaagaacttggtctgcaatatatgaagggtgaacaaccc
cactgtggattcccagagaagaatttctcaatgaatgtggagaaactggctaggaagggg
tatcgagttcttgttatagagcagacagaaacacctgaacagatggagcttcgtcgcaaa
gaggatggctctaaagataaggttgtgaaacgtgaaatatgtgcagtggttacaaaagga
actctaactgagggagagatgctgtcagcaaaccctgatgcttcttatctaatggcagtg
actgaaaactctcagaatgtggcaaaccaaaatacagagcggatttttggggtttgtgta
gttgatgttgctaccagccgcgtcattcttgggcagtttggagatgatttagagtgcagt
gccttgtcttgtctcttgtccgagctgaggcccgtggaaattataaaacctgtaaaacta
cttggtcctgaaacagagaaagtactgctaagacatacaagaagtccactagtcaatgag
ttagtcccacttttagaattctgggatgctgagagaactgctcaggaaattagacgtatc
tacaggtgcaccgttgatcaattggtttctggttctccaaagacatccaacttacattcc
gatgattctcatttggaagaagatgacttgggctgcctgccagatgtgttgtcagagctt
atgagaacaggtgagaatggcatctgtgcactttcagctcttggaggcgttcttttttat
ttaaagcaggcttttctggatgagacattactccgatttgcaaaattcgagttacttcca
agttctggttttggtgatattgtatccaaaccatacatggttcttgactcagctgccctg
gagaaccttgagatttttgagaacagcagaaatggagactcttcagggacaatatatgca
caattgaaccactgtgttaccggatttgggaagcgattgcttaaaacatggcttgcaaga
cctctatatcatgtagagttgataaaggaacgccaggatgctgttgcaagtcttcaggga
gttaatcttccttatgcacttgaatttcgaaaagcaatgactaggcttccagacatggag
cggttgcttgcacgtgtcttctctagtagtaaagcttgcgggaggaatgctaataaggtt
gttttatacgaggatgctgctaaaaaacagcttcaggagtttatttcagctttgcacggt
tgtgaactaatggttcagatatgttgttctcttggagtcatcttggagcatgttgaatct
agacaacttcatcatttgcttacaccgggtcaaggtcttcctgatgtcaactcaatttta
aaacattttaaggatgcctttgattgggtacaagccaatagttcaggtcgtataatacct
catgaaggagttgatattgaatatgactcttcctgtgaaaaagtaaaggagatagaatca
catttaacaaaatacctccaagaacagagaagattactcggaaataaatcgatcacttat
gccactgttggaaaagattcttacctgttggaagtgccagaaagtctgcgtgggagtatt
cctcgagattatgagttatgttcatcaaaaaagggtatcttcagatactggacaccaaat
attaagaaatcattgacagagctatcggaagctgaaactggtaaagagtcctcactaaaa
agcattctgcataggttaattggacaattctgcgagcatcatcttaaatggagacaattg
gtctctgtgactgcagaattggatgttttaatcagtctagcaatagcaagtgattatttt
gaaggaccgtcttgtcggccagttatcatgagttcatcatgtactaatgaggtaccccac
ttctctgcaaaaagtttgggacatccggttcttaaaagtgattctttagggaaaggtaca
tttgtctccaatgacattactattggaggttctggccatgcgagctttatccttctcact
ggtccaaacatgggtggaaagtcaactcttcttcgccaagtttgcttggctgcgatttta
gcgcagttaggagcagatgtgcctgcagagagctttgagctatctcctgttgaccgaatc
tttgttcgtatgggtgccagagatcatatcatggtaggccaaagtacatttctgacagag
ctttcagaaaccgcaacaatgctgtcatattctactcgtaattcattggtggcactggat
gaacttggacgtggaacatcgacttcagatggacaagccattgcggaatctgttcttgaa
cattttgtctacaaggtccagtgtcgaggaatgttttctacccattatcatcgactagct
gtagattatcagaacaatcctgaggtttcactctgccatatggcatgccaagttggaaat
ggagacggaggtgtggaagaagttacatttctttacaggctgactcctggtgcatgccct
aaaagctatggtgtcaacattgcacggttagctggacttcctatttccgtccttcaaaaa
gctgctgctaagtctagggaattcgaggctacatatggtaaacacaggaaggcagatagc
tttttctttcaaagtccagttgacaacatggtaagttgcatccaagggttgattagtgct
gtggaaaaatggactagtcatgagtctgccaagagcattgacattgactccctaactgaa
gtttggcatagagcaagaatacttgagcaacaaagttga
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