KEGG   Prunus persica (peach): 18790113
Entry
18790113          CDS       T03092                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
pper  Prunus persica (peach)
Pathway
pper03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pper00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    18790113
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pper03021]
    18790113
Enzymes [BR:pper01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     18790113
Transcription machinery [BR:pper03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     18790113
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 18790113
NCBI-ProteinID: XP_007225442
UniProt: M5XMB4
LinkDB
Position
G1:35030307..35038929
AA seq 1200 aa
MGASSDAKGDIGMSSKGESFSDIADMDIDDNGYDDDYDYSTSIHDLGEGFLKFFCKEAAI
AFFNEYGLISHQINSYNDFIKNGIQRVFDSFGEIIVEPGYDPSKKGESEWRYASVKFGKV
TLGMPSFWGGSDDEKEYKMLPRHARLQNMSYASKMKVNITVEVYTQKLVSSDKFKTGKSQ
YLDKQILSTDTRDIIIGSVPVMVKSDLCWMKDFEKGDCDFDHGGYFIIKGAEKTFIAQEQ
SCLKRLLITNNQGLTVAYRSEVKRHRLIIRLVGISKLENIEGVEKVLTVYFMSTEIPVWI
WFFALGVSSDREVMNLIDYDSEDASISNILFASIRDADKLNDKVDGGFRRGKNALKYVDE
VIRKTAFPPGESMEECISLYLFPNLKGLKQKARFLGYMVKSLLQAYAGRRKCDNRDDFRN
KRLDLAGELLERELKAHIGHARRRMAKALQRDLYGDRAVRPIEHYLDASIVTNGISRAFS
TGAWCHPFKRMERMSGVVATVGRANPLQTMVDMRKTRQQVQYTGKVGDARYPHPSHWGKV
CFLSTPDGENCGLVKNLATTGLVSTNVLESLIPQLLTCGMEKLVDDTFTSLRGKDKVFLN
GDWVGVCEDSLSFVLELRRMRRRKKLPHQVEIKRDVHQGEVRIFSDAGRILRPLLVVENL
NKVKASKGGKSSFQYFLDNGIIELIGAEEEEDCSTAWGIKYLFMEDKGKSATKFTHCELD
MSFLLGLSCGIIPYANHDHARRVLYQAQKHSQQAIGFSTTNPNLRVDTLSHQLHYPQRPL
FQTMTSDCLGKPGRHNRIVPKPEYYNGQNAIVAVNVHLGFNQEDSIVMNRASLERGMFRS
EHIRSYKAEVDNKESLDKRRKPDDCVNFGKMQSKFGRVDSLDDDGFPYVGANLQSGDIII
GRCSESGADHSIKLKHTERGMVQKVLLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHGQK
GVLGFLESQENFPFTIQGVVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSKRYATPF
STLSVDDITDQLHSAGFSRWGNERVYNGATGAMVRSLIFMGPTFYQRLIHMSEDKVKFRN
TGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCK
NVAYVILRTVAGGRKIRGPHCRICDSADDLVRVNVPYGAKLLCQELFSMGISLKFETRFC
NT seq 3603 nt   +upstreamnt  +downstreamnt
atgggggcgtcatcggatgccaagggagatattggtatgagcagcaagggagaaagcttt
tcagatatagctgacatggatattgatgataatggatatgatgatgattacgattattcg
actagcatacatgacctgggggaagggtttctgaaatttttttgtaaggaagctgcaata
gctttcttcaacgagtatggcctcattagtcatcaaatcaactcatacaatgacttcatc
aaaaatggtatacaaagggtctttgattcttttggtgagattatagttgagcctgggtat
gacccatcaaagaagggagaaagtgagtggcgatatgcttctgtgaagtttggcaaggtt
acccttggtatgccaagcttttggggtggttcagatgatgaaaaggagtataaaatgtta
cctaggcatgctcggcttcaaaacatgtcatatgcatccaagatgaaagtgaacattact
gttgaggtatatactcaaaagcttgtgagtagtgataagtttaagactggaaaatcacag
tatcttgataagcaaattctgagtacagacaccagagacattataattggtagtgtccct
gtgatggtgaagtctgacttgtgttggatgaaggacttcgagaaaggagactgtgatttt
gaccatggaggctatttcataatcaagggtgcggagaagacatttattgcacaagaacag
agctgtctgaagagacttcttatcacaaataatcagggattgacagtagcatacaggtca
gaggttaagaggcataggctaataattaggctagttgggatttccaaattagaaaacatt
gaaggagtagagaaagtccttactgtttacttcatgtcgacggaaatccctgtgtggata
tggttttttgcccttggtgtttcatcagacagagaggtgatgaatctgattgattatgat
agtgaagatgccagcatctcgaacatactctttgcctctattcgcgatgcggataaatta
aatgataaagtagatggggggttccgtagggggaagaatgccctcaaatatgtggatgag
gtgataaggaaaaccgcatttcctcctggggaaagtatggaagaatgcattagcctgtat
ctgttccccaatctgaaaggcctaaagcaaaaggctcgttttcttgggtatatggtaaag
tctctattacaggcctatgctggccgcaggaaatgtgacaatagggatgactttaggaac
aagaggttggacttggctggtgagcttctagagcgagagctcaaggcacatattgggcat
gcacggaggcgcatggcaaaggccttgcagagagacctttatggtgatcgtgctgtgcgg
ccgattgagcactatctagatgcttctatagtgactaatggtatttccagagcattctca
accggagcgtggtgtcatcccttcaagaggatggagaggatgtctggtgtagttgcaaca
gttgggcgagcaaatccgctgcagacaatggtggatatgaggaagacaaggcagcaggtt
caatatacagggaaggttggagatgccagatacccgcatccttctcactggggtaaggtt
tgctttctctcaaccccggatggtgagaattgtggacttgtaaaaaatttggctaccact
ggactagttagtacaaatgtactggaatctctgatacctcaattattaacatgtggcatg
gagaaattggtggatgatacttttacatcactgcgtgggaaggataaagtttttctgaat
ggggactgggttggagtttgtgaagattccctctcatttgttttggaactaaggaggatg
cgtcgcaggaaaaagttgccacatcaggtggaaatcaagagagatgtacaccaaggagaa
gtacgcatattttctgatgctggaaggatcctacgccctctcttggtagttgagaatttg
aacaaggttaaagcatccaaaggggggaaaagttctttccaatattttcttgacaatgga
ataatcgagctcattggagcagaagaagaagaagattgctctactgcgtggggtattaag
tatcttttcatggaagacaagggaaaatcagccacgaagttcacacactgtgaacttgac
atgtcatttttattaggtttaagctgtggcattatcccatatgcaaatcacgaccacgca
cggagggtcctgtaccaagcccagaagcactctcaacaagctattggtttttctaccacc
aatcctaacctcagagtggatactctgtctcaccaactgcactacccccagaggccactc
ttccagacaatgacatctgattgtcttggaaaaccaggacgccataacagaattgttcca
aagcctgaatactataatggccagaacgctatcgtggcagtcaatgtccacttaggattt
aaccaagaggatagcatagtaatgaaccgggcatcattggaacgtggtatgttccgatct
gaacacataagaagttacaaggctgaggttgacaacaaggagtctctggacaaaaggcgg
aagcctgatgattgtgttaattttggaaagatgcaaagtaaatttggacgtgttgacagc
ctcgatgatgatggttttccatatgttggtgcaaatttgcagagtggtgatattataatt
gggaggtgcagtgaatcaggagctgatcatagcatcaaactgaagcacactgaaagggga
atggttcagaaagttctactttcttctaatgatgatggaaagaattttgctgttgtatct
ctaagacaggttcgttctccatgccttggagacaagttctcaagcatgcatggacaaaaa
ggtgtcctggggtttctggagtcccaagagaacttccctttcacaatacagggggtggtt
ccagatattgtaattaatccacatgcatttccttcacgacaaactcctggtcaactccta
gaggctgctttggggaagggaattgcctgtggtggttcaaagagatatgcaacgcctttc
tctactctctctgttgatgacatcacagaccaactgcatagcgctggattttcgagatgg
ggaaatgagagagtatacaatggtgcaactggtgcaatggttcgttccctgatatttatg
ggcccaacattttaccagcgcttgattcacatgtctgaagataaagttaagtttcggaac
actgggccagtccatcctttgacccgacagccagtggcagatcggaagcgatttggtggg
atcaagtttggtgagatggaacgtgactgccttatagcccatggagcttcagcaaattta
catgaacgcctcttcactctcagtgactcctcccaaatgcatgtttgccagaaatgcaaa
aatgtggcttatgtgatcctacgaacagtcgcgggtggccgtaagatcaggggtcctcat
tgccggatttgcgactctgctgatgaccttgttcgggttaatgtaccatatggagcgaag
ctattgtgccaggagcttttcagcatgggcataagcttaaagttcgagacccggttttgt
tga

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