Pseudomonas putida GB-1: PputGB1_3461
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Entry
PputGB1_3461 CDS
T00650
Name
(GenBank) C-5 cytosine-specific DNA methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
ppg
Pseudomonas putida GB-1
Pathway
ppg00270
Cysteine and methionine metabolism
ppg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppg00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
PputGB1_3461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppg03000
]
PputGB1_3461
03032 DNA replication proteins [BR:
ppg03032
]
PputGB1_3461
03036 Chromosome and associated proteins [BR:
ppg03036
]
PputGB1_3461
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
ppg02048
]
PputGB1_3461
Enzymes [BR:
ppg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
PputGB1_3461
Transcription factors [BR:
ppg03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
PputGB1_3461
DNA replication proteins [BR:
ppg03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
PputGB1_3461
Chromosome and associated proteins [BR:
ppg03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
PputGB1_3461
Prokaryotic defense system [BR:
ppg02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
PputGB1_3461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
DUF5529
Motif
Other DBs
NCBI-ProteinID:
ABY99352
UniProt:
B0KKP8
LinkDB
All DBs
Position
3872932..3874791
Genome browser
AA seq
619 aa
AA seq
DB search
MSAFQKKNPLDFKTQYGLGFDPQDDEIVVDFFCGGGGAGTGLEMGLGRPVTVAKNHSPAA
ISMHTANHPAARHFTTDVFDGDPDEECQGRPVGWFHMSPDCTHHSQAAGGQPRKREIRNL
SWVGLKWAGKKRPRVISLENVKQILQWGPLIAKRDKATGRVMKLDGTVAAIGERVPVQQQ
FLVPDPKRRGITWRRFVHLLEGMGYQVEWRVIKACDFGAPTSRERLFMIARCDGQPIVWP
EPTHAKIPAKGQQKWRTAADCIDWSVPSKSIFGRKKELAAATLRRVAKGMKKFVLDNPQP
FIVPIANWSGELAQAAYEPLRTVTSWPRGGSFAMASPVMINAAHGDGRPGGVQRWGDGCK
DAGSPLGTVTASNGHALASAHLVKFRFNSEGSSITDPVPTITSGGNYKRPAGAAHAMGVC
TAFIEQANGGFNTTPAKGADEPLTTVTNTGSQQRLVTASLATLRRNCVGRPVDDLVPTMT
AGAEHHALVEYKLSPEHEEGALRVAAFLISYYGTENISACDAPAPTVTTKDRLGLVTVFV
KGTPYVIVDICLRMLQPHELYRAQGFPASYIIDKGADGKLFTKTEQVHMCGNSVSPPPMA
ALARANDPWRVAERSAKAA
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcatttcagaaaaagaacccgctcgacttcaaaacccagtacggacttggcttc
gatccgcaagacgatgagatcgtggtggacttcttctgcggtggcggcggcgccggtacc
gggctggagatgggcctgggcaggccggtcaccgtggccaagaaccacagccctgcagcc
ataagcatgcacaccgccaaccatcctgcagcgcggcacttcaccaccgatgtgtttgac
ggtgacccggatgaggaatgccagggccgtccggtcggctggttccatatgagcccggat
tgcacccaccacagccaggccgccggcggccagccgcgaaagcgcgagatccgcaacctg
tcttgggttgggctgaagtgggccggcaagaagcggccgcgggtcatcagcctggagaac
gtgaagcagatcctgcagtggggcccgctgatcgccaagcgcgacaaggctaccgggcgg
gtgatgaagctggacggcaccgtggctgccatcggcgaacgcgtgccggtgcagcagcag
ttcctggtccccgacccgaaacgtcgcggcatcacctggcgccggttcgtgcacttgctc
gaaggtatgggctaccaggtggaatggcgcgtcatcaaggcctgcgacttcggcgcaccc
accagccgcgagcgcctgttcatgatcgcccggtgcgatggacagccaatcgtgtggcca
gagccgacccacgccaagatcccagccaagggccagcagaagtggcgcacggccgccgac
tgcatcgactggagcgtgccgagcaaaagcatcttcggtcgcaagaaggagctggcagcc
gcaacgctgcgccgtgtggccaagggcatgaagaagttcgtgctggacaacccgcagccc
ttcatcgtgccgatcgccaactggtcgggagagctggcccaggctgcctacgagccgctg
cgtaccgttacttcctggccgcgcggcggatccttcgccatggcaagccccgtcatgatt
aacgctgcccatggcgatggtaggccaggcggggtgcagcgttggggtgatggttgcaaa
gatgctggctctccgcttggcaccgtcacagcaagcaacgggcatgccctggcatcggca
cacctggtcaagttccggttcaacagcgaaggctcatccatcaccgacccagtgccaacc
attaccagcggcggcaactacaagaggccagcaggtgcggcccatgccatgggcgtttgc
acagcgttcattgagcaggcgaacggtgggttcaacaccacgccagccaagggcgccgac
gagccgctgaccacggtcaccaacaccggcagccagcagcgcctcgtgaccgccagcctg
gccacgctccgacgcaactgtgtaggccgtcccgtagatgacctggtgccgacaatgacc
gccggcgccgagcaccacgccttggtcgagtacaaactgtcgccggagcatgaggaaggc
gccctgcgggtagcagcgttcctgatcagctactacggcacggagaacatcagcgcctgc
gacgcaccggcaccgacggttaccaccaaggatcgccttggcctggtcactgtcttcgtc
aagggcactccgtacgtgatcgtggatatctgcctgcgcatgctccagccacacgagcta
taccgcgcccaaggcttcccagccagctacatcatcgacaagggcgccgacggcaagctg
ttcaccaagaccgagcaggtacacatgtgcggcaacagcgttagcccgccaccaatggca
gcgctcgctagagccaacgacccgtggcgggtggcggaacggtccgccaaggccgcttaa
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