Pseudomonas putida GB-1: PputGB1_5097
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Entry
PputGB1_5097 CDS
T00650
Name
(GenBank) thiamine biosynthesis/tRNA modification protein ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
ppg
Pseudomonas putida GB-1
Pathway
ppg00730
Thiamine metabolism
ppg01100
Metabolic pathways
ppg01240
Biosynthesis of cofactors
ppg04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
ppg00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
PputGB1_5097
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
PputGB1_5097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppg03016
]
PputGB1_5097
Enzymes [BR:
ppg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
PputGB1_5097
Transfer RNA biogenesis [BR:
ppg03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
PputGB1_5097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
ABZ00982
UniProt:
B0KM72
LinkDB
All DBs
Position
complement(5694339..5695793)
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AA seq
484 aa
AA seq
DB search
MKLIVKVFPEITIKSRPVRKRFIRQLAKNIRNVLKDLDPELAVDGVWDNLEVVTRIEDEK
VQREMIERLTCTPGITHFLQVEEYPLGDFDDIVAKCKHHFGHLLAGKHFAVRCKRGGHHD
FTSMDVDRYVGSQLRQQCGAAGIELKKPEVLVRIEIRDQRLYVIHNQHQGIGGYPLGALE
QTLVLMSGGFDSTVAAYQMMRRGLMTHFCFFNLGGRAHELGVMEVAHYLWKKYGSSQRVL
FISVPFEEVVGEILNKVDNSYMGVTLKRMMLRGAAHMADRLEIDALVTGEAISQVSSQTL
PNLSIIDSATDKLVLRPLLASHKQDIIDQANEIGTADFAKHMPEYCGVISVNPTTHAKRH
RMEHEEKQFDMAVLERALERAKLISIDHVIDELGKDVEIEEVTEALSGQIVIDIRHPDAQ
EDEPLVLDGIEVQAMPFYAINSKFKHLDPTRQYLLYCDKGVMSRLHAHHLLSEGHANVRV
YRPT
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttatcgtcaaagtcttcccagaaatcaccatcaagagccggccggtgcgcaag
cgtttcatccgccagctcgccaagaacatccgcaacgtgctcaaggacctcgatcctgag
ctcgcggtcgatggtgtctgggacaatctcgaagtggtcacccgcatcgaggacgaaaaa
gtccagcgcgagatgatcgagcgcctcacctgcacgccgggtatcacccacttcctgcag
gtagaggaatacccgctgggtgacttcgacgacatcgtcgccaagtgcaagcaccacttc
ggtcacctgctggccggcaagcacttcgccgtgcgctgcaagcgcggtggccaccatgac
ttcacctcgatggacgtcgaccgttacgtcggcagccagctgcgccagcagtgtggcgcc
gccggcatcgagctgaagaagcccgaagtgctggtgcgcatcgaaatccgcgaccagcgc
ctgtacgtcatccacaaccagcaccagggcatcggcggttacccgctgggcgccctggag
cagaccctggtgctgatgtccggtggcttcgactccaccgtggcggcttaccagatgatg
cgccgtggcctgatgacccacttctgcttcttcaacctcggcggccgtgcccacgagctg
ggcgtgatggaagtggcccactacctgtggaaaaagtacggcagcagccagcgcgtgctg
ttcatcagcgtgccgttcgaagaggtggttggcgagatcctcaacaaggtcgacaacagc
tacatgggtgtgaccctcaagcgcatgatgctgcgcggtgccgcgcacatggccgaccgc
ctggaaatcgacgcgctggtgaccggcgaggcgatctcccaggtatccagccagaccttg
ccgaacctgtcgatcatcgactcggccaccgacaagctggtgctgcgcccgctgctggcg
agccacaagcaggacatcatcgaccaggccaacgaaatcggcaccgccgacttcgccaag
cacatgccagaatactgcggcgtgatttcggtgaacccgaccacccatgccaagcgtcac
cgcatggagcatgaagagaagcagttcgacatggcggtgctggagcgcgccctggaacgc
gccaagctcatctccatcgaccatgtgatcgacgagctgggcaaggacgtcgaaatcgaa
gaagtgaccgaggctctgtcggggcagatcgtcatcgacattcgtcaccctgatgcccag
gaagacgaacctctggtgctggacggtatcgaagtccaggccatgccgttttatgccatc
aacagcaagttcaagcacctggaccccacgcgccagtacttgctgtattgcgacaagggt
gtgatgagccgtttgcacgcacaccacctgctcagtgagggacatgccaatgtgcgtgtt
tatcgtccgacataa
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