Halopseudomonas phragmitis: BVH74_13300
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Entry
BVH74_13300 CDS
T07765
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ppha
Halopseudomonas phragmitis
Brite
KEGG Orthology (KO) [BR:
ppha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppha03009
]
BVH74_13300 (rimO)
Enzymes [BR:
ppha01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
BVH74_13300 (rimO)
Ribosome biogenesis [BR:
ppha03009
]
Prokaryotic type
ribosomal protein modification factors
BVH74_13300 (rimO)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AQZ95664
UniProt:
A0A1V0B799
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All DBs
Position
complement(2849982..2851301)
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AA seq
439 aa
AA seq
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MSNPKVGFVSLGCPKALVDSERILTQLRTEGYEVVPTYEDADVVVVNTCGFIDSAKAESL
DAIGEAIAENGRVIVTGCMGVEENAIRDVHPSVLAVTGPQQYEQVVNAVHEVVPPKADHN
PLIDLVPPQGVKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGEVLGEAERLVK
AGVKELLVISQDTSAYGVDIKYRTGFWNGRPVKSRMTEMCEALSELGAWVRLHYVYPYPH
VDELIPLMAEGKILPYLDIPFQHASPKVLKAMKRPAFEDKTLARIKSWREICPELTIRST
FIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANELGLEPVPDDIKQERWER
FMAHQQAISAARLQQKIGKIIPVIIDEVDEEGPIGRSMADAPEIDGNVYIDTEQALSPGD
IVMVTVTDADEYDLWAQLA
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatcccaaagtcgggttcgtttcccttggctgccccaaggccctggtagactcc
gagcgcatcctcacgcaattgcgcaccgaaggctacgaggtggtccccacctatgaggac
gctgatgtcgtggtggttaatacctgcggctttatcgacagcgccaaggccgaatcgctt
gatgccatcggtgaagccattgccgaaaacggccgggtgatcgtgactggctgcatgggt
gtggaggaaaacgccattcgtgatgttcaccccagcgtgctcgcggtcactggcccgcaa
cagtacgaacaggtggtcaacgccgttcatgaggtcgtcccgcccaaggccgaccacaac
ccgctgatcgatctggtgccgccgcagggcgtcaagctgaccccgcgccactacgcctac
ctgaagatttccgaaggctgcaaccatagctgcagcttctgcattatcccctcgatgcgc
ggcaaactggtcagccgcccggttggtgaagtgctgggcgaagccgagcgtctggtcaag
gccggggtaaaggagctgttggtcatttcccaggacaccagcgcctacggggtcgatatc
aagtatcgcaccggcttctggaatggccgcccggtcaagtcgcgcatgaccgaaatgtgc
gaagcactgagtgaactcggcgcctgggtacgcctgcattatgtgtatccctacccgcac
gttgacgaactgattccgctgatggccgaaggcaagatcctgccctacctggatatcccc
ttccagcacgccagccccaaagtactcaaggccatgaaacgcccggctttcgaggacaag
accctggcccggatcaagtcctggcgggaaatctgccccgaactgaccattcgctcgacc
ttcatcgtcggcttccccggcgaaaccgaggaagacttccagtacctgctcgactggctg
accgaagcccagctcgaccgggttggctgcttccagtattcgccggtcgaaggtgccccg
gccaacgaactgggcctggagccagtgccggacgatatcaagcaggagcgttgggagcgg
ttcatggctcaccagcaggctatcagcgccgcgcgactgcaacagaagatcggcaagatc
atcccggtgatcatcgacgaggtggacgaagaaggcccgatcggtcgcagcatggccgat
gccccggaaatcgacggtaacgtctatatcgataccgaacaagccctcagccccggcgat
atcgtcatggtcaccgtcaccgacgccgacgaatacgacctctgggcccaactggcctga
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