Pseudomonas phenolilytica: HU825_04560
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Entry
HU825_04560 CDS
T08532
Symbol
gabD
Name
(GenBank) NADP-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
pphn
Pseudomonas phenolilytica
Pathway
pphn00250
Alanine, aspartate and glutamate metabolism
pphn00310
Lysine degradation
pphn00350
Tyrosine metabolism
pphn00650
Butanoate metabolism
pphn00760
Nicotinate and nicotinamide metabolism
pphn01100
Metabolic pathways
pphn01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pphn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
HU825_04560 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
HU825_04560 (gabD)
00310 Lysine degradation
HU825_04560 (gabD)
00350 Tyrosine metabolism
HU825_04560 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
HU825_04560 (gabD)
Enzymes [BR:
pphn01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
HU825_04560 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
HU825_04560 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
HU825_04560 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
UIP85835
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All DBs
Position
complement(964259..965707)
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AA seq
482 aa
AA seq
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MQLKDPALFRQQAYIDGAWLDADSGQTISVNNPATGETLGTVPKMGAAETRRAIDAAERA
LPAWRELTAKERAQKLRRWFELLMENQDDLGRLMTLEQGKPLAEAKGEIAYAASFIEWFA
EEAKRIYGDTIPGHQKDKRIIVIKQPIGVTAAITPWNFPSAMITRKAGPALAAGCTMVIK
PASQTPFSALALVALAERAGIPKGVLSVVTGSASDIGNELTANPKVRKISFTGSTEVGAK
LMEQCAPGIKKVSLELGGNAPFIVFDDADLDEAVKGAMQSKYRNAGQTCVCVNRIYVQDG
VYDAFAEKFQAAVAKLRVGNGLEEGTDVGPLIDDRAAAKVREHIEDAVAQGARLVAGGQA
HSLGGSYFEPSVLVDVPDSAKVAKEETFGPLAPLFRFKDEAEVIAKANDTEFGLASYFYA
RDLGRVFRVAEALEYGMVGINTGLISTEVAPFGGVKSSGLGREGSKYGIEDYLEIKYLCM
AL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcaactcaaagaccccgcgctgttccgccagcaggcctatatcgatggcgcctggctg
gatgccgacagcggccagaccatcagcgtgaacaacccggccaccggcgagacgctcggc
acggtgccgaagatgggcgccgccgagacccgccgcgccatcgacgccgccgagcgcgcg
ctgccggcctggcgcgagctgaccgccaaggaacgcgcgcagaagctgcgccgctggttc
gagctgctgatggagaaccaggacgatctcggtcgtctgatgacgctggagcagggcaag
ccgctggccgaggccaagggcgagatcgcctacgccgcctccttcatcgagtggttcgcc
gaggaagccaagcgcatctacggcgacaccattcccggccatcagaaggacaagcgcatc
atcgtcatcaagcagccgatcggcgtgaccgcggcgatcaccccgtggaatttcccctcg
gcgatgatcacccgcaaggccggcccggcgctggccgctggctgcaccatggtgatcaag
ccggcttcgcagacgccgttctcggcgctggcgctggtcgcgctggccgagcgtgcgggc
attcccaagggcgtgctcagcgtggtgaccggctcggccagtgacatcggcaacgagctg
accgccaaccccaaggtgcgcaagatttccttcaccggctccaccgaagtcggcgccaag
ctgatggagcagtgcgcgccggggatcaagaaggtctccctggagctgggcggcaatgcg
ccgttcatcgtcttcgacgatgccgacctcgacgaggcggtgaagggcgccatgcagtcc
aagtaccgcaacgccgggcagacctgtgtgtgcgtcaaccgcatctacgtgcaggacggc
gtgtatgacgccttcgccgagaaattccaggcggcggtggccaagctgcgggtcggcaac
ggcctggaggagggcaccgacgtcggcccgctgatcgacgaccgcgccgccgccaaggtg
cgcgagcacatcgaggatgccgtcgcccagggcgcgcggctggtagccggtgggcaggcg
cattcgctgggcggcagctatttcgagccgagcgtgctggtcgatgtgccggacagcgcc
aaggtggccaaggaagagaccttcggcccgctggcgccgctgttccgcttcaaggacgag
gccgaggtgatcgccaaggcgaacgacaccgagttcggcctggcttcctacttctacgcc
cgcgatctgggccgggtgttccgcgtcgccgaggcgctggagtacggcatggtcggcatc
aacaccggactgatctccaccgaagtggcgccgttcggcggggtgaagtcgtccggcctc
ggccgcgaaggctccaagtacggcatcgaggactacctggagatcaagtacctctgcatg
gcgctctga
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